DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DNApol-eta and polh

DIOPT Version :9

Sequence 1:NP_649371.2 Gene:DNApol-eta / 40438 FlyBaseID:FBgn0037141 Length:885 Species:Drosophila melanogaster
Sequence 2:XP_031757700.1 Gene:polh / 100487374 XenbaseID:XB-GENE-996388 Length:676 Species:Xenopus tropicalis


Alignment Length:890 Identity:257/890 - (28%)
Similarity:389/890 - (43%) Gaps:236/890 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MQNKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNYAARAKGVTRHMRG 74
            |::..:|||.|||||||:.|||::.:|..:|:|:|||||..|:|||||||:|.|||.||||:|.|
 Frog     1 MESGQERVVALVDMDCFYVQVEQRMNPALKNKPVAVVQYKTWKGGGIIAVSYEARAFGVTRNMFG 65

  Fly    75 DEAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETVNHRM 139
            |:||.||.::.|.:|.....|||.:.||:|..||..|:.||. ::||||:||||:|:|::|..|:
 Frog    66 DDAKKLCADLQLARVREAHGKADLTNYREASVEVMEVMSRFA-VVERASIDEAYIDLTDSVQKRL 129

  Fly   140 QQMQSGAFALQPQELVNTFAVGYPSIG---DYVNKITNRFANPYMDDERYQMSYDQ--NDLPA-- 197
            ::|  |...:..:.|..|:..|||...   |.::|           :|..|...:|  ..||.  
 Frog   130 REM--GVAPIPGELLKTTYVQGYPQCEPDCDTLSK-----------EELRQRGLEQWLESLPIGD 181

  Fly   198 VRQSDIRLLIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQTILPLTETASLF 262
            ....|::|.:||.:..|:||||:|||.::|||||||||:|||||.|:||||:||||.......||
 Frog   182 PCSPDLKLAVGAIIVEEMRAAVEKETTFQCSAGIAHNKVLAKLACGLNKPNRQTILCQGSVPGLF 246

  Fly   263 DSLPVGKIKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFNISRGIDLEAVTP 327
            ..||:.|::.||||.|..:.|:|.::::||:.:|:|..||..|.||.|:||:::.|||:.|.|.|
 Frog   247 SELPISKVRHLGGKLGTSIRESLSVEYIGQLTQFTEQHLQNHFGEKTGSWLYSLCRGIEDEPVKP 311

  Fly   328 RFYSKSIGCCKKFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIENNRRAKHMVVQYVQDIDGE 392
            |...|||||.|.|||:..::..:.:|:||.:||.|:.:||:||...|:|.||.:.|...|.....
 Frog   312 RQLPKSIGCSKIFPGKTALSTQEQVQYWLLQLSLELEERLQKDRDANHRVAKLLTVGLNQLGKPP 376

  Fly   393 EVASSRSTALRDYDQESIVRLSLDLIKANTKTFLRPG-SESALNNAIKFLGISVGKFETVSSGQN 456
            ....||..||..|:.:   ::|.|.... .|:|...| .::|.:..:..|.:|..||        
 Frog   377 YGGMSRCCALTQYNAQ---KISSDAFVV-LKSFNLAGMHQAAWSPPLTLLQLSASKF-------- 429

  Fly   457 KLQEMFANQAAKKRRVSGDEPGQLPKVEMEKKQKQTDEFKMKSFFANYLQGAKKEDAKADGISAN 521
                               .|..||                                 :.||:  
 Frog   430 -------------------SPTALP---------------------------------SSGIA-- 440

  Fly   522 PLAAAAGAPNKNFVEEYKHKLHAAVRTEGTVLTSTPAEFKESFFSQYLKQQKKTGQQGSVTSRED 586
                                                     ||.|     ||..|.|        
 Frog   441 -----------------------------------------SFLS-----QKPPGSQ-------- 451

  Fly   587 SLDVQELAEELDAIEADNSKDFEEDTEEETELTSDTHMSKPEGQSSDAGQEQDPNTLNDSTGNDL 651
                                                   ||.|.....|.::.|:.....:|   
 Frog   452 ---------------------------------------KPPGSQKPPGSQKPPSPTPHGSG--- 474

  Fly   652 YVETGIVPPTLTEDELKPSTSKRKFDEIESSVSNYKECYVEFAVPNLRTDILPTIKCDQCGANIP 716
                      .||.. .|.|.|.:..:.|....:..:...:.|..  :.:.:|.       |::|
 Frog   475 ----------ATEPS-SPRTPKTQRKDREGRPPSAIQLLFQRAAE--KREAVPP-------ADVP 519

  Fly   717 DEVKSLQTHRDHHFAQE---LSRTLRSTEREERTQSRQKISLKPTPP---KKSKKTAGS--GSSS 773
            ..........:..|..:   ..||      .|.:.:|.::..:|..|   ..|....||  ...|
 Frog   520 VSPPKQNPPANRAFGYQGFFKQRT------PESSDARSEMGSEPDRPGADTVSDSVPGSIATGES 578

  Fly   774 YSTAPPSNSITKFFRAKPTQEQAPSDPQMNQCPECKAFIKCVDMPEHLDYHVARNLQRELNQQDL 838
            .:||||:..               |:..|..|..|...:...:||||:|:|.||:||...:... 
 Frog   579 CATAPPAGH---------------SEEDMMCCERCGQRLLVWEMPEHMDFHFARDLQDSFSVPS- 627

  Fly   839 RTRTAALNKEKISPV-QPKKQSQKKLNSTIS-ASSSGTKTIAQFF 881
            .:|...:....::|: :||.:::|.|.|:.. ..:...:|:..||
 Frog   628 PSRMPPVPAPVLTPLTRPKNKAKKPLASSAKRPRTDANRTLHAFF 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-etaNP_649371.2 PolY_Pol_eta 20..447 CDD:176456 184/434 (42%)
zf_UBZ 705..736 CDD:408236 3/33 (9%)
zf_UBZ 805..832 CDD:408236 12/26 (46%)
polhXP_031757700.1 PolY_Pol_eta 10..428 CDD:176456 184/435 (42%)
PHA03247 <431..660 CDD:223021 64/401 (16%)
zf_UBZ 595..621 CDD:408236 11/25 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 189 1.000 Domainoid score I3231
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 371 1.000 Inparanoid score I2080
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1593931at2759
OrthoFinder 1 1.000 - - FOG0001835
OrthoInspector 1 1.000 - - oto103672
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4768
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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