DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC22A and Sv2c

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_083486.1 Gene:Sv2c / 75209 MGIID:1922459 Length:727 Species:Mus musculus


Alignment Length:647 Identity:128/647 - (19%)
Similarity:212/647 - (32%) Gaps:243/647 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHNEF------------------VF- 141
            |:.::|:|..|....||.| .:.:.|          :.|.|..|                  || 
Mouse   118 KDRRELESERRADEEELAQ-QYELII----------QECGHGRFQWALFFVLGMALMADGVEVFV 171

  Fly   142 -------RDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGIL 199
                   .:.::.|.|.     ...|    :|:|..||...|....|.:||:.||..|:.:...:
Mouse   172 VGFVLPSAETDLCIPNS-----GSGW----LGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSV 227

  Fly   200 GAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEVL 264
            ......:.||...||:|||...|..........|.|....|::..::|....|.:.:|:.:|.:.
Mouse   228 NGFFAFLSSFVQGYGFFLVCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIY 292

  Fly   265 LAM----------------SAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAK 313
            .:.                ||..||.||:.:.:...|.:..:.....:|||.|:||..||.:.|.
Mouse   293 ASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAW 357

  Fly   314 NILR--------------RAAHVNKRELPESVLDKLVLANRDK--------LQQSSE-------- 348
            .||:              :...|||.:.|:.: |:|:....|.        ::..:|        
Mouse   358 MILKLIHDTNMRARGQPEKVFTVNKIKTPKQI-DELIEIESDTGTWYRRCFVRIRTELYGIWLTF 421

  Fly   349 ---SRFPIREAFKNFKWRIANCSLCWIVHVLVYYGLSL---NVVL-------------LDGDKYN 394
               ..:|:||       .....::.|......|||||:   :|:.             :..|||.
Mouse   422 MRCFNYPVRE-------NTIKLTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTRNVQKDKYA 479

  Fly   395 NFA-------------------------------------------------------------- 397
            ||:                                                              
Mouse   480 NFSINFTMENQIHTGMEYENGRFLGVKFKSVTFKDSVFKSCTFDDVTSVNTYFKNCTFIDTLFDN 544

  Fly   398 --------------------------------YIA-----------LVEIPGFFMPLLIMDRFGR 419
                                            |.|           |..:||..:..|:|||.||
Mouse   545 TDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGR 609

  Fly   420 RYSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLR----- 479
            ...|.|.|:.||:.|. .::.|..:.::..:|.|...|||:| :..|.....|:|||:.|     
Mouse   610 LTMLGGSMVLSGISCF-FLWFGTSESMMIGMLCLYNGLTISA-WNSLDVVTVELYPTDRRATGFG 672

  Fly   480 --NSLLSFCSMMGR--FGSMLAPQTPLLAKYYANAPAMLFAGAAIVSGLLTLFFPETTNVVL 537
              |:|....:::|.  |||:::....:        |.:|.:...:..||:.|..|:|...||
Mouse   673 FLNALCKAAAVLGNLIFGSLVSITKAI--------PILLASTVLVCGGLVGLRLPDTRTQVL 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 128/647 (20%)
MFS 146..530 CDD:119392 111/562 (20%)
Sv2cNP_083486.1 synapt_SV2 1..727 CDD:130366 128/647 (20%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..128 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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