DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC22A and Sv2c

DIOPT Version :10

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_083486.1 Gene:Sv2c / 75209 MGIID:1922459 Length:727 Species:Mus musculus


Alignment Length:647 Identity:128/647 - (19%)
Similarity:212/647 - (32%) Gaps:243/647 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHNEF------------------VF- 141
            |:.::|:|..|....||.| .:.:.|          :.|.|..|                  || 
Mouse   118 KDRRELESERRADEEELAQ-QYELII----------QECGHGRFQWALFFVLGMALMADGVEVFV 171

  Fly   142 -------RDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGIL 199
                   .:.::.|.|.     ...|    :|:|..||...|....|.:||:.||..|:.:...:
Mouse   172 VGFVLPSAETDLCIPNS-----GSGW----LGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMSV 227

  Fly   200 GAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEVL 264
            ......:.||...||:|||...|..........|.|....|::..::|....|.:.:|:.:|.:.
Mouse   228 NGFFAFLSSFVQGYGFFLVCRLLSGFGIGGAIPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIY 292

  Fly   265 LAM----------------SAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAK 313
            .:.                ||..||.||:.:.:...|.:..:.....:|||.|:||..||.:.|.
Mouse   293 ASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPCVSSVVALTFMPESPRFLLEVGKHDEAW 357

  Fly   314 NILR--------------RAAHVNKRELPESVLDKLVLANRDK--------LQQSSE-------- 348
            .||:              :...|||.:.|:.: |:|:....|.        ::..:|        
Mouse   358 MILKLIHDTNMRARGQPEKVFTVNKIKTPKQI-DELIEIESDTGTWYRRCFVRIRTELYGIWLTF 421

  Fly   349 ---SRFPIREAFKNFKWRIANCSLCWIVHVLVYYGLSL---NVVL-------------LDGDKYN 394
               ..:|:||       .....::.|......|||||:   :|:.             :..|||.
Mouse   422 MRCFNYPVRE-------NTIKLTIVWFTLSFGYYGLSVWFPDVIKHLQSDEYALLTRNVQKDKYA 479

  Fly   395 NFA-------------------------------------------------------------- 397
            ||:                                                              
Mouse   480 NFSINFTMENQIHTGMEYENGRFLGVKFKSVTFKDSVFKSCTFDDVTSVNTYFKNCTFIDTLFDN 544

  Fly   398 --------------------------------YIA-----------LVEIPGFFMPLLIMDRFGR 419
                                            |.|           |..:||..:..|:|||.||
Mouse   545 TDFEPYKFIDSEFQNCSFLHNKTGCQITFDDDYSAYWIYFVNFLGTLAVLPGNIVSALLMDRIGR 609

  Fly   420 RYSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLR----- 479
            ...|.|.|:.||:.|. .::.|..:.::..:|.|...|||:| :..|.....|:|||:.|     
Mouse   610 LTMLGGSMVLSGISCF-FLWFGTSESMMIGMLCLYNGLTISA-WNSLDVVTVELYPTDRRATGFG 672

  Fly   480 --NSLLSFCSMMGR--FGSMLAPQTPLLAKYYANAPAMLFAGAAIVSGLLTLFFPETTNVVL 537
              |:|....:::|.  |||:::....:        |.:|.:...:..||:.|..|:|...||
Mouse   673 FLNALCKAAAVLGNLIFGSLVSITKAI--------PILLASTVLVCGGLVGLRLPDTRTQVL 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 MFS_SLC22 136..530 CDD:340875 115/598 (19%)
Sv2cNP_083486.1 synapt_SV2 1..727 CDD:130366 128/647 (20%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..128 3/9 (33%)
Blue background indicates that the domain is not in the aligned region.

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