DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC22A and sv2a

DIOPT Version :10

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_696434.2 Gene:sv2a / 568033 ZFINID:ZDB-GENE-131001-1 Length:733 Species:Danio rerio


Alignment Length:693 Identity:134/693 - (19%)
Similarity:212/693 - (30%) Gaps:270/693 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KDSEDVT--LDAILKHLGQFGRFQLIIFLLICLPMMFHA--MFSVTYVFTAATVTHRCSVEECDL 80
            ||.|::.  .:.||:..|. ||||..::.::.|.:|...  :|.|.:|                 
Zfish   135 KDQEELAQQYETILQECGH-GRFQWTLYFVLGLALMADGVEIFVVGFV----------------- 181

  Fly    81 PGSNYYEPHTNWSIPKNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHNEFVFRDDE 145
                         :|...||:                                            
Zfish   182 -------------LPSAEKDM-------------------------------------------- 189

  Fly   146 VTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGILGAVLGVIRSFS 210
                      |..|....|:|.|..||...|..:.|.:|||.||..::.:...:.:|.....||.
Zfish   190 ----------CLSEPNKGMLGLIVYLGMMVGAFVWGGLADRIGRRQTLLISLSINSVFAFFSSFV 244

  Fly   211 PSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEVLLAM-------- 267
            ..|..||....|..:.........|....|.:..::|....|.:.:|:.:|.:..|.        
Zfish   245 QGYSSFLFCRLLSGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPH 309

  Fly   268 --------SAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNK 324
                    ||..||.||:.:.:...||:..:|....:|||.|:.|..||.:.|..||::....|.
Zfish   310 YGWSFQMGSAYQFHSWRVFVLVCAFPSVAAIAALTTMPESPRFYLENGKHDEAWMILKQVHDTNM 374

  Fly   325 RE--LPESV-----------LDKLV----------------LAN--------------------- 339
            |.  .||.|           :|:||                |.|                     
Zfish   375 RAKGYPERVFSVTTIKTVKQMDELVDMGGEATAWHQRWRIKLTNLFHQVWGNFLTVFNPEYRRIT 439

  Fly   340 ---------------------------RDKLQQSSESRFPIREA--------------------- 356
                                       ..|.:.||.::..|:|.                     
Zfish   440 YMMMAVWFSMSFSYYGLTVWFPDMIKYLQKQEYSSRTKVFIKEKVEHVTFNFTLENQIHRNGEYF 504

  Fly   357 ---------------------------------FKN-------------FKWRIANCSL--CWIV 373
                                             |:|             ||:|:.|..|  ...:
Zfish   505 NNKFLNLKMKSMVFEDSLFEECYFEDITSSNTFFRNCTFISTLFYNTDLFKYRLINSKLINSTFL 569

  Fly   374 HVLVYYGLSLNVVLLDGDKYNNFAYI--------ALVEIPGFFMPLLIMDRFGRRYSLCGLMLAS 430
            |       :....:||....|| ||:        .|..:||..:..|:||:.||...|.|..:.|
Zfish   570 H-------NKEGCMLDFSDENN-AYMIYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVIS 626

  Fly   431 GLCCIGTIFTGADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSM 495
            .:.|....|..::..::.| |.|.|.::| ||:..|.....|:||::.|.:...|.:.:.:..::
Zfish   627 CVSCFFLSFGNSESAMIAL-LCLFGGISI-ASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAV 689

  Fly   496 LAPQTPLLAKYYANAPAMLFAGAAIVSG-LLTLFFPETTNVVL 537
            |.............|..:|||..|:.:| .|.|..|||...||
Zfish   690 LGISIFQSFVGITKAVPILFASGALAAGSFLALKLPETRGQVL 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 MFS_SLC22 136..530 CDD:340875 111/564 (20%)
sv2aXP_696434.2 synapt_SV2 1..733 CDD:130366 134/693 (19%)

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