DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and SVOP

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_061181.1 Gene:SVOP / 55530 HGNCID:25417 Length:548 Species:Homo sapiens


Alignment Length:575 Identity:138/575 - (24%)
Similarity:219/575 - (38%) Gaps:176/575 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EVAPPAKDS---EDVTLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSV 75
            |.|.|..|:   || .::||     .||:||..:.:|..|..|..||..:.....|..:      
Human    59 EFANPTDDTFMVED-AVEAI-----GFGKFQWKLSVLTGLAWMADAMEMMILSILAPQL------ 111

  Fly    76 EECDLPGSNYYEPHTNWSIPKNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHNEFV 140
                         |..|.:|                                             
Human   112 -------------HCEWRLP--------------------------------------------- 118

  Fly   141 FRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGILGAVLGV 205
                              .|:::::.::..:|......:.|.::|:|||...:.:..:.....|:
Human   119 ------------------SWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGI 165

  Fly   206 IRSFSPSYGWFLVFEFLDNM------TSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVG--- 261
            :.:|:|.|.|.||...|...      .|.|||:       |.:..|.|.....:|.||:|:|   
Human   166 LSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYA-------EFLPMKARAKCILLIEVFWAIGTVF 223

  Fly   262 EVLLAMSAKAFHDWRILLRITYGPSLILLAY--FWILPESVRWLLSQGKEERAKNILRRAAHVNK 324
            ||:||:.......||.||.::..| |:|.|.  || ||||.|:.:..|.:|:|...|:|.|..|.
Human   224 EVVLAVFVMPSLGWRWLLILSAVP-LLLFAVLCFW-LPESARYDVLSGNQEKAIATLKRIATENG 286

  Fly   325 RELPESVLDKLVLANRDKLQQSSESRFPIREAF-KNFKWRIANCSLCWIVHVLVYYGL------- 381
            ..:|   |.||:::.:       |.|..:|:.| .:|:|........|..:...||||       
Human   287 APMP---LGKLIISRQ-------EDRGKMRDLFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTEL 341

  Fly   382 --------------------SLNVVLLDGDKYNNFAYIALVEIPGFFMPLLIMDRFGRR------ 420
                                ||....|..:.|.:..:..|.|.||..:.|.|:||.||:      
Human   342 FQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALC 406

  Fly   421 ---YSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLRNSL 482
               :|.|.|:|   ..|:|       :.||.|:|| :.:..|:..||..|.:..|:|||..|...
Human   407 FVIFSFCSLLL---FICVG-------RNVLTLLLF-IARAFISGGFQAAYVYTPEVYPTATRALG 460

  Fly   483 LSFCSMMGRFGSMLAPQTPLLAKYYANAPAML----FAGAAIVSGLLTLFFPETT 533
            |..||.|.|.|:::   ||.:|:....:...|    ::|..:::.|.:.|.|..|
Human   461 LGTCSGMARVGALI---TPFIAQVMLESSVYLTLAVYSGCCLLAALASCFLPIET 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 130/551 (24%)
MFS 146..530 CDD:119392 115/435 (26%)
SVOPNP_061181.1 MFS_SVOP 87..509 CDD:340999 124/536 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.666667 Normalized mean entropy S2472
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.860

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