DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and slc22a2

DIOPT Version :10

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_998315.1 Gene:slc22a2 / 406424 ZFINID:ZDB-GENE-040426-2167 Length:562 Species:Danio rerio


Alignment Length:567 Identity:161/567 - (28%)
Similarity:254/567 - (44%) Gaps:46/567 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHT 90
            |.:.||:..|.|||.|:.||...||..:..:...|..||...|..|.|..     ||.:......
Zfish     3 TFEEILEEAGTFGRSQIRIFCTFCLVSIPFSFVYVGIVFQGFTPEHWCRD-----PGVSEIRERC 62

  Fly    91 NWSIP------------KNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKE--------ACA 135
            .||:.            .:|.....|.|:.    ..||.:...|.......|:.        :|.
Zfish    63 GWSLQDARRATVPLINGSSGASYSQCGRFD----VDWNATGLSCENPDGDFNQSQLSVMPMMSCV 123

  Fly   136 HN---EFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGG 197
            ..   ::|.|...||   :|.:.|.|.|.:.|.....::|...|....|::||:|||..|..:..
Zfish   124 DGWEYDYVGRQSFVT---EFDLVCGDAWYVDMFQATLSIGFLVGSIAIGYLADKYGRMKSFLMTN 185

  Fly   198 ILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGE 262
            ....|.|::.:.||:|...|||..|........:...:|:..||||...|........:|:::|.
Zfish   186 FFIGVTGILVATSPNYISLLVFRALFGFGVKGGWMVGYVLITELVGVDHRRTVGVTYQLFFSMGI 250

  Fly   263 VLLAMSAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNKREL 327
            :||.:.|....:||.|..:...|.:..|.|:|.:|||.||||:|.|...|..|.:..|..|::.|
Zfish   251 LLLPLLAYFITNWRWLQVVFTVPYICFLTYYWFIPESPRWLLTQNKIAEAVEITKSIAKENRKTL 315

  Fly   328 PESVLDKLVLANRDKLQQSSESRFPIREAFKNFKWRIAN--CSLCWIVHVLVYYGLSLNVVLLDG 390
            .:    |:.....|.:...|.:.|  .:.||..|.|...  .|..|....:||.||.:.:.:|.|
Zfish   316 SK----KIETLKDDNIDSGSTASF--MDLFKTAKLRTYTFILSFNWFTSAVVYQGLIMRLGILGG 374

  Fly   391 DKYNNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVG 455
            :.|.:|....:||:|..|:.||.::|.|||.......:.:|..|:.|.|.......|:..:..||
Zfish   375 NVYVDFLISGIVELPAAFLILLTIERIGRRLPFATANIVAGAACLITAFIPDSMFWLKSAVACVG 439

  Fly   456 KLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAP-QTPLLAKYYANAPAMLFAGAA 519
            :|.||.:|:::.|..:|:|||.:||..:|.||.:...|.::|| ....||..:...|.::|...|
Zfish   440 RLGITMAFEMVVFVNTELYPTVIRNLGVSVCSTLCDVGGIVAPFLLYRLAVIWLELPLIIFGALA 504

  Fly   520 IVSGLLTLFFPETTNVVLPTTVQEADAIGVKKQS--KSKDLDLVVTA 564
            .|:|.|.|..|||..|.||.|:.:.:.....|::  :|:.|:.::|:
Zfish   505 FVAGGLVLLLPETKGVPLPETIDDIEHPNRNKENPQQSQQLENLMTS 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 MFS_SLC22 136..530 CDD:340875 120/399 (30%)
slc22a2NP_998315.1 MFS_SLC22A1_2_3 116..515 CDD:340937 121/407 (30%)

Return to query results.
Submit another query.