DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC22A and slc22a4

DIOPT Version :10

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:587 Identity:169/587 - (28%)
Similarity:273/587 - (46%) Gaps:82/587 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KDSEDVTLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSVEECDLPGSN 84
            :|.:|:|     ..||.:|.|||.:||.:.:.::.:....:..||...|..|.|.:.|    ..|
Zfish     2 RDYDDIT-----SFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPE----QIN 57

  Fly    85 YYEPHTNWSIPKNGKD----LDSCNRYTNSELPQWNHSVDICSADHFTKN---------KEACA- 135
            ......:.:||...:|    ..||:||....|.|       .|..::|.|         .|.|. 
Zfish    58 ISSVWRDAAIPTQMQDGVLKRSSCSRYRLDTLRQ-------LSMLNYTPNVEVNLSQIETEPCVD 115

  Fly   136 ----HNEFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALG 196
                ..||.    :.||..::.:.|:.|:|..:..:|...|...|..:.|.::|||||...:...
Zfish   116 GWSYSQEFY----QSTIVTEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTM 176

  Fly   197 GILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFY--A 259
            ..|..:..:|:.||||:..|....|....:..:.|...:|:|.|::.|..|||..| :.||.  .
Zfish   177 MALQTITILIQMFSPSWEVFSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGS-LGVFMGSG 240

  Fly   260 VGEVLLAMSAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNK 324
            :|::...::|.....||.|:.......|:....:|.:|||.|||||||:...|:.:|||||..|:
Zfish   241 IGQMFFPLAAYFIRSWRWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNR 305

  Fly   325 RELPESVLDKLVLANRDKLQQSSESRF---PIREAFKNFK--WRIANCSLCWIVHVLVYYGLSLN 384
            ...||      |:.:..:::::::.|.   .|.:...|..  ..|..|||.|:|..:.||.|.||
Zfish   306 VTAPE------VIFSSSEIEEAAKKRIQKHSILDILSNCNAVSTILICSLLWMVITMSYYALILN 364

  Fly   385 VVLLDGDKYNNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQL 449
            ...|.|:.|.||...|:||:|.:.:..|::....||......:|..|    ..||      ::||
Zfish   365 TTNLHGNPYLNFFLSAVVEVPAYIIAALLLRFCSRRICQASTLLLGG----ALIF------IIQL 419

  Fly   450 V----------LFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLA 504
            :          |.::|||.:||:|.|:|...||::||.:||..:..|||..|.||:::|....|.
Zfish   420 IPTELQGLATALEMLGKLCVTAAFCVVYAVTSELFPTVVRNMAMGSCSMTARIGSIISPFIIYLG 484

  Fly   505 KYYANAPAMLFAGAAIVSGLLTLFFPETTNVVLPTTVQEADAI-GVKK---------QSKSKDLD 559
            .||...|.::..|.|:.||:::|..||:...|||.|:.:..:: |:::         :.|||.|.
Zfish   485 NYYRYIPYIVIGGLALFSGVMSLLLPESKGKVLPETIAQMQSVRGLRRCRKPPAASTEDKSKVLQ 549

  Fly   560 LV 561
            .|
Zfish   550 EV 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 MFS_SLC22 136..530 CDD:340875 125/410 (30%)
slc22a4NP_957143.1 MFS_SLC22A4_5_OCTN1_2 106..510 CDD:340934 127/424 (30%)

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