DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and F23F12.13

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001033356.1 Gene:F23F12.13 / 3896740 WormBaseID:WBGene00044455 Length:528 Species:Caenorhabditis elegans


Alignment Length:561 Identity:138/561 - (24%)
Similarity:231/561 - (41%) Gaps:105/561 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RFQLIIFLLICLPMMF--HAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHTNWSIPKNGKDL 101
            ||..:.|.|....:.|  ..:||:.|.|:               ||.:..:|...:|.||     
 Worm     8 RFHWLCFFLWQFALFFCCQQIFSIFYNFS---------------PGLSCDDPSFQFSKPK----- 52

  Fly   102 DSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHNEFVFRDDEVTISNDFGIFC-----DDEWK 161
              | :.:.||         |||  ..|.|.......|..|.    ::..||.:||     |..| 
 Worm    53 --C-KLSKSE---------ICS--ELTANCSKIVIEEAPFH----SMVQDFKMFCGTKAYDAAW- 98

  Fly   162 LSMVGTINNLGQFFGIPIG----GFVADRYGRSFSIALGGILGAVLGVIRSFSPSYGWFLVFEFL 222
               |.||    ||.|:.||    |.:.|.:||......|..:|.:.||...|:||:..|..|.|:
 Worm    99 ---VATI----QFIGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWEVFAAFRFI 156

  Fly   223 DNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEVLLAMSAKAF--HDWRILLRITYGP 285
            ...:.:::....:...:|.:.|::||...|    |:..|...|..:...|  ..||.....|...
 Worm   157 VGTSIASILIVFYAYILEFIEPEQRVFLRS----FFNWGYARLVFTLACFICGYWRSAAIATSLL 217

  Fly   286 SLILLAYFWILPESVRWLLSQGKEERAKNILRRAA------HVNKRELPESVLDKLVLANRDKLQ 344
            ||.:|....|||||.:|..::.:...|:...:|.|      :||..:....:        .:||:
 Worm   218 SLPILPVLLILPESPKWFNTKKRFRDARAAEKRVAWLSGIPYVNDEDQSIEI--------SEKLE 274

  Fly   345 QSSESRFPIREAFKNFKWRIANCSL----CWIVHVLVYYGLSLNVVLLDGDKY-NNFAYIALVEI 404
            :.|...:.:::.|.:  |.||..::    .|....|..:|..||...|.|:.| :.|...|:...
 Worm   275 EKSTKIYTMKDLFTS--WTIAYRTIVVGSLWFSTSLSAFGSDLNSGNLAGNFYLSQFVSGAVTAF 337

  Fly   405 PGFFMPLL--IMDRFGRR----YSLCGLMLASGLCCIGTIFTGAD------QPVLQLVLFLVGKL 457
            ...|:.||  .:..|.||    |....::|...:..:..|...:|      :.:..:::.::|..
 Worm   338 AKIFVFLLDTYVPSFDRRRLHQYPQIAMILCYCVIMVLMILPESDCGSQGSRDLAIIIINIIGVS 402

  Fly   458 TITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYANAPAMLFAGAAIVS 522
            .|..::...|..|.|.:||.:|...:..||::.|.|::||||...|:..|..||..:......:|
 Worm   403 FIEITWDACYLVAVECFPTKIRTIGIGTCSLLARTGALLAPQMAYLSDIYRPAPYAVVCSIGTIS 467

  Fly   523 GLLT-LFFPETTNVVL----PTTVQEADAIGVKKQSKSKDL 558
            .|:: :|.|:|..|.|    ||...:.|    :|:|.::::
 Worm   468 LLISCVFLPDTKGVDLAALDPTEELDYD----RKKSMTENI 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 134/541 (25%)
MFS 146..530 CDD:119392 104/418 (25%)
F23F12.13NP_001033356.1 MFS 74..476 CDD:391944 106/427 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163095
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D762280at2759
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.860

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