DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and CG3168

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster


Alignment Length:561 Identity:123/561 - (21%)
Similarity:218/561 - (38%) Gaps:128/561 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 YEPHTNWSIPKNGKDLDSCNRYTNSELPQWNH------------------SVDICS-----ADHF 127
            |||.::    .|||..|     ...:.|...|                  ||.:..     ..:|
  Fly    82 YEPDSH----ANGKQQD-----VERDAPDGGHGGHGPPGKGGKGGKGRKKSVPLPEPTAPIVANF 137

  Fly   128 TKNKEACAHNEF----------VFRDDEV-TISNDF---GIFCDDEWKLSMVGTINNLGQFFGIP 178
            .:..|.|.:.:|          |...:|: .||..|   ...||.:......|.:|:: .|.|:.
  Fly   138 ERAIELCGYGKFHYILLAICGLVSTSEEMDVISMSFILPSAECDLDLNTETKGWLNSI-IFIGMM 201

  Fly   179 IG----GFVADRYGRSFSIALGGILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGI 239
            :|    |.:||.:||...:.:...:.|...|..|||.:|.:|::|.||:...........:....
  Fly   202 VGAYFWGSIADSFGRKKVLIVISFMNAFCIVASSFSQTYSFFMLFRFLNGAALGGSGPVIWSYFA 266

  Fly   240 ELVGPKRRVLACSVITVFYAVGEVLLAMSA--------------KAFHDWRILLRITYGPSLILL 290
            |.....:|....|.:..|:..|.:.:|..|              ..::.|||.|.:...||.::.
  Fly   267 EFQPKAKRGSMLSFMAAFWTFGNLFVASLAWLIIPRTIGFTTPYFTYNSWRIFLLVCSLPSFLVG 331

  Fly   291 AYFWILPESVRWLLSQGKEERAKNILRRAAHVNKRELPESVL-------DKLVLANRDKLQQSSE 348
            ...:.||||.::||::||::||..|.|.....|.:..|:..:       :||:.:|.:...:.|.
  Fly   332 FLLFYLPESPKFLLTRGKKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGNVKNKYSR 396

  Fly   349 SRFPI----REAFKN--FKWRIANCSLCWIVHVLVYYGLSL------------------------ 383
            ....:    |..||:  .::.|.:.::.:..|: .||||.:                        
  Fly   397 MISGMVDHSRALFKSPILRFTIVSITINFTFHI-GYYGLLMWFPELFNRFEEYEKAFPDQSAGVC 460

  Fly   384 ----NVVLLDGDKYNN-------------FAYIALVE-IPGFFMPLLIMDRFGRRYSLCGLMLAS 430
                .||.|..::.||             .:.|:|.. :|...:.:|.||..||::.|....:.:
  Fly   461 AVTDYVVNLAKEQSNNGTCSSDIPQSVFMESLISLASALPANLLAILGMDMLGRKFFLIAGTMTA 525

  Fly   431 GLCCIGTIFTGADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSM 495
            |:|.....|..:.  |..||:..:....|:|:...|....:|::||.||.:.::...:..|.|.:
  Fly   526 GICSALMYFVRSS--VQNLVVSAIFSGAISAANAALDCLITEVFPTKLRATGVAISMVAARLGGI 588

  Fly   496 LAPQTPLLAKY---YANAPAMLFAGAAIVSGLLTLFFPETT 533
            :.  ..::|:.   |..:|..:.:|..|..||:.|..|.||
  Fly   589 IG--NIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLLLPNTT 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 123/561 (22%)
MFS 146..530 CDD:119392 103/463 (22%)
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 99/454 (22%)
MFS 154..623 CDD:119392 105/474 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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