DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and Slc22a17

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_803156.2 Gene:Slc22a17 / 305886 RGDID:631405 Length:520 Species:Rattus norvegicus


Alignment Length:547 Identity:124/547 - (22%)
Similarity:209/547 - (38%) Gaps:125/547 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 VFTAATVTHRCSVEECDLPGSNYYEPHTNWSIPKNGKDL-------------DSCNRYTNSELPQ 114
            :||.|...| |.........|.:.:|..:..:...|..|             .||:.:..   |.
  Rat     6 IFTLAPPLH-CHYGALPPNASGWEQPPNSSGVSVAGAALAASAASRVVTSTDPSCSGFAP---PD 66

  Fly   115 WNHSVDICSADHFTKNKEACAHNEFVFRDDEVTISNDFG---IFCDDEWKLSMVGTINNLGQFFG 176
            :||    |..|             :.:....|..:|..|   :.||..|::.:...:..||...|
  Rat    67 FNH----CLKD-------------WDYNGLPVLTTNAIGQWDLVCDLGWQVILEQILFILGFASG 114

  Fly   177 IPIGGFVADRYGRSFSIALG-GILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIE 240
            ....|:.|||:||...:.|. |::|. .||..:.:.|....:...||.....:.:....:::.:|
  Rat   115 YLFLGYPADRFGRRGIVLLTLGLVGP-CGVGGAAAGSSTGIMTLRFLLGFLLAGVDLGVYLMRLE 178

  Fly   241 LVGPKRRV---LACSVITV---FYAVGEVLLAMSAKAFHDWRILLRITYGPSLILLAYFW--ILP 297
            |..|.:|:   ||..::.|   |..:|   ||:.:|   |||.|.|:...|.::.|.|.|  :..
  Rat   179 LCDPTQRLRVALAGELVGVGGHFLFLG---LALVSK---DWRFLQRMITAPCILFLFYGWPGLFL 237

  Fly   298 ESVRWLLSQGKEERAKNILRRAAHVNK---RELPESVLDKL-VLANRDKLQQSSESRFPIREAFK 358
            ||.|||:.:.:.|.|:::||..|..|:   :.|.|...:.| .|.|...|..:|...|.....::
  Rat   238 ESARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQEALQELENTCPLPTTSTFSFASLLNYR 302

  Fly   359 NFKWRIANCSLCWIVHVLVYYGLSLNVVLLDGDKYNNFAYIAL----VEIPGFFMPLLIMDRFGR 419
            |. |:                    |:::|.   :.||...|:    ..:.|...|        .
  Rat   303 NI-WK--------------------NLLILG---FTNFIAHAIRHCYQPVGGGGSP--------S 335

  Fly   420 RYSLCGLMLASGLCCIGTIFTGAD------QPVLQLVLFLVGKLTIT-------------ASFQV 465
            .:.||.| ||||...:..:|.|..      :.:|.|.:.|.|..::.             .:|.|
  Rat   336 DFYLCSL-LASGTAALACVFLGVTVDRFGRRGILLLSMTLTGIASLVLLGLWDYLNDAAITTFSV 399

  Fly   466 LYFF------------ASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYANAPAMLFAGA 518
            |..|            |:|:.||.:|...|.....:|..|.:..|...|...:.|....::.|..
  Rat   400 LGLFSSQASAILSTLLAAEVIPTTVRGRGLGLIMALGALGGLSCPAQRLHMGHGAFLQHVVLAAC 464

  Fly   519 AIVSGLLTLFFPETTNVVLPTTVQEAD 545
            |::..|..:..|||...:||..:::.:
  Rat   465 ALLCILSIMLLPETKRKLLPEVLRDGE 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 124/540 (23%)
MFS 146..530 CDD:119392 103/434 (24%)
Slc22a17NP_803156.2 MFS 106..476 CDD:119392 97/409 (24%)
2A0114 111..475 CDD:273326 95/403 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

Return to query results.
Submit another query.