DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and Slc22a1

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_036829.1 Gene:Slc22a1 / 24904 RGDID:3224 Length:556 Species:Rattus norvegicus


Alignment Length:558 Identity:169/558 - (30%)
Similarity:262/558 - (46%) Gaps:45/558 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHT 90
            |:|.:|:.:|:||.||...|||:||.....|...|..||...|..|     .|..||........
  Rat     3 TVDDVLEQVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPGH-----YCQNPGVAELSQRC 62

  Fly    91 NWS--------IPKNGKD-----LDSCNRYTNSELPQWNHS----VDICSADHFTKNKE-----A 133
            .||        :|..|..     |..|.||.    ..||.|    ||..|:  ...|:.     .
  Rat    63 GWSQAEELNYTVPGLGPSDEASFLSQCMRYE----VDWNQSTLDCVDPLSS--LVANRSQLPLGP 121

  Fly   134 CAHNEFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGI 198
            |.|. :|:.....:|..:|.:.|.|.||:.:..:..|||.|.|..:.|::|||:||...:.:..:
  Rat   122 CEHG-WVYDTPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTL 185

  Fly   199 LGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEV 263
            :.:|.||:.:.:|.|...|:|..|..|.|...:.:.:.:..|.||...|.....:..:.:.||.|
  Rat   186 VTSVSGVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQMAFTVGLV 250

  Fly   264 LLAMSAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNKRELP 328
            .||..|.|..|||.|......|:.:.|.|:|.:|||.||||||.:..||..|:.:.|..|.: :|
  Rat   251 GLAGVAYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTRAVRIMEQIAQKNGK-VP 314

  Fly   329 ESVLDKLVLANRDKLQQSSESRFP-IREAFK--NFKWRIANCSLCWIVHVLVYYGLSLNVVLLDG 390
            .:.|..|.|.     :.:||.|.| ..:.|:  |.:.........|....::|.||.::|.....
  Rat   315 PADLKMLCLE-----EDASEKRSPSFADLFRTPNLRKHTVILMYLWFSCAVLYQGLIMHVGATGA 374

  Fly   391 DKYNNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVG 455
            :.|.:|.|.:|||.|..|:.|:.:||.||.|.:....|.:|..|:..||...:...|.:.|..:|
  Rat   375 NLYLDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVTGAACLLMIFIPHELHWLNVTLACLG 439

  Fly   456 KLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAP-QTPLLAKYYANAPAMLFAGAA 519
            ::..|...|::....:|:|||.:||..:..||.:...|.:..| ....|.:.:...|.:||....
  Rat   440 RMGATIVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLMEVWQALPLILFGVLG 504

  Fly   520 IVSGLLTLFFPETTNVVLPTTVQEADAIGVKKQSKSKD 557
            :.:|.:||..|||..|.||.|::||:.:| :::||:|:
  Rat   505 LTAGAMTLLLPETKGVALPETIEEAENLG-RRKSKAKE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 159/530 (30%)
MFS 146..530 CDD:119392 116/387 (30%)
Slc22a1NP_036829.1 2A0119 12..525 CDD:273328 159/530 (30%)
MFS 125..515 CDD:119392 117/396 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347302
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.960

Return to query results.
Submit another query.