DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and Slc22a3

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_035525.1 Gene:Slc22a3 / 20519 MGIID:1333817 Length:551 Species:Mus musculus


Alignment Length:565 Identity:174/565 - (30%)
Similarity:275/565 - (48%) Gaps:78/565 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVF-------------TAATVTHRCSVEE 77
            |.|..|:..|:|||||..:|||:||..:..|...|..||             .|..:..||:   
Mouse     3 TFDQALRKAGEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGSQPDYYWCRGPRATALAERCA--- 64

  Fly    78 CDLPGSNYYEPHTNWS-------IPKNGKDLDSCNRY------TNSELPQWNHSVDICSADHFT- 128
                    :.|...|:       :|...:....|:||      |:|||          |.|..| 
Mouse    65 --------WSPEEEWNLTTPELHVPAERRGQGHCHRYLLEATNTSSEL----------SCDPLTA 111

  Fly   129 -KNKEA----CAHNEFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYG 188
             .|:.|    |: .::.:.:...||.:.|.:.|.:.|.|.:...|.|||...|....|:.|||||
Mouse   112 FPNRSAPLVSCS-GDWRYVETHSTIVSQFDLVCSNAWMLDLTQAILNLGFLAGAFTLGYAADRYG 175

  Fly   189 R--SFSIALGGILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLAC 251
            |  .:.|:..|:  .:.||:.:|:|::..|::|.||..:.....:.|||||..|:||.|:|.:..
Mouse   176 RLIIYLISCFGV--GITGVVVAFAPNFSVFVIFRFLQGVFGKGAWMTCFVIVTEIVGSKQRRIVG 238

  Fly   252 SVITVFYAVGEVLLAMSAKAFHDWR-ILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNI 315
            .||.:|:.:|.::|...|.....|: |.|.|:. ||.:.|.|:|::|||.|||:::.:.|:|..|
Mouse   239 IVIQMFFTLGIIILPGIAYFTPSWQGIQLAISL-PSFLFLLYYWVVPESPRWLITRKQGEKALQI 302

  Fly   316 LRRAAHVNKRELPESVLDKLVLANRDKLQQSSES--RFPIREAFKNFKWRIANCSL----CWIVH 374
            |||.|..|.:.| .|...::.:.:.:....|...  |.|          ::..|:|    .|...
Mouse   303 LRRVAKCNGKHL-SSNYSEITVTDEEVSNPSCLDLVRTP----------QMRKCTLILMFAWFTS 356

  Fly   375 VLVYYGLSLNVVLLDGDKYNNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIF 439
            .:||.||.:.:.|:.|:.|.:|....|||:||..:.||.::|.|||.......:.:|:.|:.|.|
Mouse   357 AVVYQGLVMRLGLIGGNLYIDFFISGLVELPGALLILLTIERLGRRLPFAASNIVAGVSCLVTAF 421

  Fly   440 TGADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPL-L 503
            .....|.|:..:..:|:|.||.:|:::|...||:|||.|||..:|.||.:..||.::||.... |
Mouse   422 LPEGIPWLRTTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRL 486

  Fly   504 AKYYANAPAMLFAGAAIVSGLLTLFFPETTNVVLPTTVQEADAIG 548
            |..:...|.::|...|.|.|.|.:..|||..:.||.||::.:.:|
Mouse   487 AAIWLELPLIIFGILASVCGGLVMLLPETKGIALPETVEDVEKLG 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 168/546 (31%)
MFS 146..530 CDD:119392 129/393 (33%)
Slc22a3NP_035525.1 2A0119 12..523 CDD:273328 168/546 (31%)
MFS 145..513 CDD:119392 125/381 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844038
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.960

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