DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and Slc22a1

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_033228.2 Gene:Slc22a1 / 20517 MGIID:108111 Length:556 Species:Mus musculus


Alignment Length:551 Identity:167/551 - (30%)
Similarity:266/551 - (48%) Gaps:31/551 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRC-SVEECDLPGSNYYEP- 88
            |:|.:|:|:|:||.||...|||:||.....|...|..||...|..|.| |....:|.....:.| 
Mouse     3 TVDDVLEHVGEFGWFQKQAFLLLCLISASLAPIYVGIVFLGFTPDHHCRSPGVAELSQRCGWSPA 67

  Fly    89 -HTNWSIPKNGKD-----LDSCNRYTNSELPQWNHSVDIC-------SADHFTKNKEACAHNEFV 140
             ..|:::|..|..     |..|.:|.    ..||.|...|       :|:........|.|. :|
Mouse    68 EELNYTVPGLGSAGEASFLSQCMKYE----VDWNQSTLDCVDPLSSLAANRSHLPLSPCEHG-WV 127

  Fly   141 FRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGILGAVLGV 205
            :.....:|..:|.:.|.|.||:.:..:..|||.|.|..:.|::|||:||...:.:..::.::.||
Mouse   128 YDTPGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLVTSLSGV 192

  Fly   206 IRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEVLLAMSAK 270
            :.:.:|.|...|:|..|..|.|...:.:.:.:..|.||...|.....:..|.:.||.|.||..|.
Mouse   193 LTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQVAFTVGLVGLAGVAY 257

  Fly   271 AFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNKRELPESVLDKL 335
            |..|||.|......|:.:.|.|:|.:|||.||||||.:..:|..|:.:.|..| |::|.:.|..:
Mouse   258 AIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTQAVRIMEQIAQKN-RKVPPADLKMM 321

  Fly   336 VLANRDKLQQSSESRFP-IREAFKNFKWRIANCSL--CWIVHVLVYYGLSLNVVLLDGDKYNNFA 397
            .|.     :.:||.|.| ..:.|:....|.....|  .|....::|.||.::|.....:.|.:|.
Mouse   322 CLE-----EDASERRSPSFADLFRTPSLRKHTLILMYLWFSCAVLYQGLIMHVGATGANLYLDFF 381

  Fly   398 YIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVGKLTITAS 462
            |.:|||.|..|:.|:.:||.||.|.:....|.:|..|:..||...:...|.:.|..:|::..|..
Mouse   382 YSSLVEFPAAFIILVTIDRIGRIYPIAASNLVAGAACLLMIFIPHELHWLNVTLACLGRMGATIV 446

  Fly   463 FQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAP-QTPLLAKYYANAPAMLFAGAAIVSGLLT 526
            .|::....:|:|||.:||..:..||.:...|.:..| ....|.:.:...|.:||....:.:|.:|
Mouse   447 LQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLMEVWQALPLILFGVLGLSAGAVT 511

  Fly   527 LFFPETTNVVLPTTVQEADAIGVKKQSKSKD 557
            |..|||..|.||.|::||:.:| :::||:|:
Mouse   512 LLLPETKGVALPETIEEAENLG-RRKSKAKE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 156/523 (30%)
MFS 146..530 CDD:119392 116/387 (30%)
Slc22a1NP_033228.2 2A0119 12..525 CDD:273328 156/523 (30%)
MFS 125..515 CDD:119392 117/396 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843894
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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