DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and T12B3.2

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_501177.1 Gene:T12B3.2 / 188439 WormBaseID:WBGene00020445 Length:478 Species:Caenorhabditis elegans


Alignment Length:524 Identity:122/524 - (23%)
Similarity:208/524 - (39%) Gaps:117/524 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 FHAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHTN----WSIPKNGKDLDSCNRYTNSELPQ 114
            ||....:|:.|...            ..|.|.:..::|    |.. .:.|....||.|.      
 Worm     8 FHICAFITWQFANF------------FAGQNIFGIYSNNVSKWKC-GDSKPTKDCNIYL------ 53

  Fly   115 WNHSVDICSADHFTKNKEACAHNEFVFRDDEV-TISNDFGIFCDDE-WKLSMVGTINNLGQFFGI 177
                              :|..:...|.|... :.:.:|...|... :..|....:..:|...|.
 Worm    54 ------------------SCPKSNLTFVDPPFQSAAIEFDWICGSSVFYQSFFSQVQYVGVLIGT 100

  Fly   178 PIGGFVADRYGRSFSIALGGILGAVLGVIRS-FSPSYGWFLVFEFLDNMT-SSTLYSTCFVIGIE 240
            .:.|.::||:||. .|.:..|..|:.....| .:||........||..:: ...|...|..| :|
 Worm   101 LLFGSLSDRFGRR-PIGILVISNAICSTFASGLAPSVKILFPLRFLVGLSIGGMLVVICAWI-ME 163

  Fly   241 LVGPKRRVLACSVITVFYAVGEVLLAMSAKAF--HDWRILLRITYGPSL----ILLAYFWILPES 299
            ::.|::|:    |:..|:..|...:.:::..:  .:||:   .||..||    .||...:::|||
 Worm   164 VILPQQRM----VVRGFFNWGWTRIFLTSICYFTREWRL---ATYVSSLSLIPALLLVIFVIPES 221

  Fly   300 VRWLLSQGKEER---AKNILRRAAHV------NKRELPESVLDKLVLANRDKLQQSSESRFPIRE 355
            ..||.|:|.:.|   ::..:.|.|.|      :|...|:|::|.|            :::...::
 Worm   222 PVWLHSRGFKARMIQSEMQIARIAGVPYVPVQHKLVRPKSLMDTL------------KTKGMFKK 274

  Fly   356 AFKNFKWRIANCSLCWIVHVLVYYGLSLNVVLLDGDKYNNFAYIALVEIPGFF--MPLLIMD--- 415
            .|  ..|.:      |.:..:..:...|:...|.||.|.|..:..::.:   |  |.||.:|   
 Worm   275 LF--ILWTM------WFIIAICGFANDLSSGTLAGDLYLNQLFFGILLV---FSKMLLLFVDTYF 328

  Fly   416 -RFGRRYSLCGLMLASGLCC--IGTIFTGAD-QPVLQLVLFLVGKLTITASFQVLYFFASEIYPT 476
             .|.||....|..:.: |||  |.|.|...| ..:..|:::|:|...|..::...|..|.|:..|
 Worm   329 TNFKRRTLHQGSQIGT-LCCFIILTTFMSMDYHGIGVLIVYLIGTTFIEYTWDACYLCAIELMET 392

  Fly   477 NLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYAN---APA----MLFAGAAIVSGLLTLFF-PETT 533
            ..|.|....||::.|.|.:|||...     |||   :||    ::..|:|.:  |::.|| ||:.
 Worm   393 PSRASATGSCSLIARIGMILAPFLT-----YANTWWSPAVNVTVIVLGSANL--LISYFFLPESK 450

  Fly   534 NVVL 537
            .|.|
 Worm   451 GVNL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 122/524 (23%)
MFS 146..530 CDD:119392 103/419 (25%)
T12B3.2NP_501177.1 2A0119 <64..456 CDD:273328 108/431 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.