DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and C44C10.3

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_509958.2 Gene:C44C10.3 / 183452 WormBaseID:WBGene00008084 Length:474 Species:Caenorhabditis elegans


Alignment Length:481 Identity:114/481 - (23%)
Similarity:183/481 - (38%) Gaps:116/481 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LPQWNHSVDICSADHFTKN---KEACAHNEFVFRDDEVT-ISNDFGIFCDDEWKL-SMVGTINNL 171
            :|:|.     |.....||:   .::|..:...|.|...| ::.||...|...... |....:..|
 Worm    35 VPKWK-----CGDGPVTKDCKVYQSCPKDNLTFVDPIFTSVAMDFDWVCGSSAHYQSFFSLVQYL 94

  Fly   172 GQFFGIPIGGFVADRYGRSFSIALGGILGAVLGVI----RSFSPSYGWFLVFEFLDNMTSSTLYS 232
            |...|..:.|.::|:|||...    |||..|:.:|    ...||:              ...|:.
 Worm    95 GVLVGTVLFGTLSDKYGRKPI----GILVIVIAIISLLGTGLSPN--------------RQLLFI 141

  Fly   233 TCFVIGIELVGPKRRVLAC--------------SVITVFYAVG--EVLLAMSAKAFHDWRILLRI 281
            ..|..|:.:.|    ||.|              .||..|:..|  .|.:.:......:||:...:
 Worm   142 ARFCSGLSIAG----VLVCICAWILESILSHQRMVIRAFFNWGWTRVFITVVCYLTQEWRLASYV 202

  Fly   282 TYG---PSLILLAYFWILPESVRWLLSQGKEERAKNI-----LRRAAHVNKRELPESVLDKLVLA 338
            ...   |:|::|.:  ::|||..||.|:|  |.||.|     :.:.|.|:...:...::....|.
 Worm   203 CAACLVPALLMLIF--LIPESAIWLHSKG--ETAKMIESEKFMAKIAGVSYVPIEHKLIHSKTLL 263

  Fly   339 NRDKLQQSSESRFPIREAFKNFKWRIANCSLCWIVHVLVYYGLSLNVVLLDGDKYNNFAYIALVE 403
            .....:...:..|.:        |      :.|....:..:...||...|.|:.|.|.|...::.
 Worm   264 ETLNTKGLFKKLFVL--------W------IMWFFVAVCGFANDLNSNSLAGNLYLNQALFGILL 314

  Fly   404 IPGFFMPLLI---MDRFGRRY----SLCGLMLASGLCCI-------GTIFTGADQPVLQLVLFLV 454
            :....:.|.:   .:.|.||.    |..|::::..:..|       ||.|         |:::|.
 Worm   315 VLSKIVLLFVDTKFENFKRRTLHQGSQSGMIISFLILAIFLWIDYHGTGF---------LIVYLF 370

  Fly   455 GKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYANA---PAMLFA 516
            |.:.|..::..:|..|.|...|:.|.|.:..||:|.|.||:|||...     |||.   ||:.| 
 Worm   371 GTMFIEYTWDAVYLCAIESMETSSRASAVGSCSLMARIGSLLAPFLT-----YANTWWPPAVYF- 429

  Fly   517 GAAIVSGLLTL-----FFPETTNVVL 537
             ..||.|.:.|     |..||.||.|
 Worm   430 -TIIVLGTVNLIISFMFLQETKNVNL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 114/481 (24%)
MFS 146..530 CDD:119392 101/435 (23%)
C44C10.3NP_509958.2 2A0119 <64..456 CDD:273328 107/447 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.