DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and C46C2.2

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_501604.2 Gene:C46C2.2 / 177744 WormBaseID:WBGene00008110 Length:520 Species:Caenorhabditis elegans


Alignment Length:589 Identity:136/589 - (23%)
Similarity:231/589 - (39%) Gaps:155/589 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHTN------ 91
            |:...|.:::.:.:||...|..  .||:..:|                |....|.|.||      
 Worm     2 HIIPPGIYRVDVLILISYQMCH--FFSIQQLF----------------PIFLNYTPKTNCIQTAQ 48

  Fly    92 ----WSIPKNGKDLDSCNRYTNSELPQWNHSVDICS-------ADHFTKNKEACAHNEFVFRDDE 145
                :.:||:     .|..| |...|      ::|:       :|..|:.    :|:.:      
 Worm    49 GKVCYDVPKS-----KCLEY-NENFP------NLCANLTGTALSDCHTEK----SHSYY------ 91

  Fly   146 VTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGILGAVLGV-IRSF 209
            .:.:.:|.|:|...||......:..:|...|..|.|:|||:.||..:.    ||..::|: ..|.
 Worm    92 SSAAMEFEIYCRPGWKDFRPAFVQYVGVLIGNIILGYVADQIGRKKTF----ILSMLIGIPSLSL 152

  Fly   210 SPSYGWFLVFEFLDNMTSSTLYSTCFVIG----IELVGPKRRVLACSVITVF--YAVGEVLLAMS 268
            |.::.....|.....:|...:..| .::|    .|||.|.:|.    .:..|  :|...::|.:.
 Worm   153 SATFNSIAAFYIFRALTGIGIAGT-MIVGWAYFSELVSPHQRF----KLRTFSNWANARIMLTLV 212

  Fly   269 AKAFHDWRILLRITYGPSLILLA-YFWILPESVRWLLSQGKEERAKNILRRAAHVNKREL----- 327
            |....:||:...::...|||.|| .::|||||..||..:|:.|.|:...:|.|.:...|.     
 Worm   213 ALFTGEWRLSSHVSAVISLITLAIVYFILPESHIWLRKKGRYEEAEVSRKRIADLAGIEFVPMPP 277

  Fly   328 PESVLDKLVLANRDKLQQSSESRFPIREAFKNFKWRIANCSLCWIVHVLVYYGLSLNVVLLD--- 389
            ||...|.:          ..|....|...|.:.:.| .|..:.|    |:::...:...|.|   
 Worm   278 PEKAADNV----------EPEKAVNICTVFADPQLR-KNILILW----LMWFVTGMTAYLTDLCG 327

  Fly   390 GDKYNNF--------AYIALVE-IPGF---FMPLLIMDRFGRRY-SLCGLMLASGL--CCIGTIF 439
            ||...||        ..:::|. |.||   ::|.:     |||: .||...||...  |.|..:|
 Worm   328 GDMTKNFWVGQFLSGILLSVVRIIMGFADGYLPWM-----GRRFVLLCSQSLAIVFFGCVIAFLF 387

  Fly   440 TGADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLA 504
            .|.........::|...:..:..::..|..|||:.||::|.:..:.||::|||.::         
 Worm   388 AGEKGQWYYTAVYLASFVFTSIVWEPCYLCASELMPTDVRATSTASCSIVGRFANI--------- 443

  Fly   505 KYYANAPAMLFAGAAIVSGLLTLFFPET---------TNVVLPTTVQEADAIGVKKQSKSKDLDL 560
                        ||:::|||.|::.|..         ||||.        |....:::|:..||.
 Worm   444 ------------GASMLSGLKTVYEPGVHMISISLGLTNVVA--------AYFFLQETKNCSLDK 488

  Fly   561 VVTA 564
            ..|:
 Worm   489 AGTS 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 130/561 (23%)
MFS 146..530 CDD:119392 103/414 (25%)
C46C2.2NP_501604.2 2A0119 58..486 CDD:273328 118/507 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162847
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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