DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A and oct-1

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:562 Identity:153/562 - (27%)
Similarity:265/562 - (47%) Gaps:35/562 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ADPAVEVAPPAKDSEDVTLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYV-FTAATVTHR 72
            |:.:.|:...|....|  .|.:|:.:|.:|.:|::.|.:||||....:.||...: |......|.
 Worm    10 AEISQEILMSATKPPD--FDFVLEQVGNYGTYQIVFFFIICLPTSLPSAFSAFNIPFVVGNPPHT 72

  Fly    73 CSVEECDLPGSNYYEPHTNWSIPKNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKN------K 131
            |.:.|    |..|..|.|      |...:.||.:|..:::..: .:......|.::..      :
 Worm    73 CHIPE----GKEYLRPLT------NDTQILSCKQYNETQINVF-RAFTSAPVDTYSDRISLVPCQ 126

  Fly   132 EACAHNEFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYG--RSFSIA 194
            ....::...:.|..||   :|.:.||.:..:.:..|...:|.|.|..:.|:|||::|  |||.:.
 Worm   127 NGWDYDNSTYLDSLVT---EFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVI 188

  Fly   195 LGGILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYA 259
            |..::  |.|...||:.....|::..|...:....|:...|:|.:|.:|...|:.:..:.::|:.
 Worm   189 LTVLI--VCGTASSFAKDIESFIILRFFTGLAFPALFQIPFIICMEFMGNSGRIFSGLMTSLFFG 251

  Fly   260 VGEVLLAMSAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNK 324
            ....||.:.|.....||.|......|....:.|::.||||.||.:|.||...||..|::.|.:|.
 Worm   252 AAMALLGVVAMFIRRWRQLTFFCNAPFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNG 316

  Fly   325 RELPESVLDKLV--LANRDKLQQSSESR--FPIREAFK--NFKWRIANCSLCWIVHVLVYYGLSL 383
            :...:  :|:||  :.|.....:..|::  ..:.:.||  |.:.:....:..|:::.::|.||:|
 Worm   317 KSNVD--VDELVDSMKNHQNAAEEKETKRSHNVTDLFKTPNLRRKTLIVTYIWVMNAIIYNGLTL 379

  Fly   384 NVVLLDGDKYNNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQ 448
            ||..|..|.|.:|.....||:||:|:...::...|||::|...|:..|:.|:..:|.....|.|.
 Worm   380 NVSNLPVDDYWSFIINGAVELPGYFVVWPLLQCAGRRWTLAATMIVCGIGCVSAMFMPDGYPWLV 444

  Fly   449 LVLFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYANAPAM 513
            .....:||..:.:.|.|:|.||.|:|||.:|...:...||:...|.:|||....|.|.....|.:
 Worm   445 ASASFIGKFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSMVAGSGLLLAPHIVNLGKIVKILPLL 509

  Fly   514 LFAGAAIVSGLLTLFFPETTNVVLPTTVQEADAIGVKKQSKS 555
            :....|:.:|:||.|.|||....||.|:::|:..|.|.:..|
 Worm   510 IMGLMALSAGILTFFLPETLGAPLPMTIEDAENFGKKPEPDS 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 142/519 (27%)
MFS 146..530 CDD:119392 113/391 (29%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 142/519 (27%)
MFS 134..526 CDD:119392 114/398 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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