DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC22A and str-176

DIOPT Version :9

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001294210.1 Gene:str-176 / 13197055 WormBaseID:WBGene00006220 Length:540 Species:Caenorhabditis elegans


Alignment Length:561 Identity:138/561 - (24%)
Similarity:231/561 - (41%) Gaps:88/561 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PADPAVEVAPPAKDSEDVTLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHR 72
            |.|....|..|....:.:.:....|.:|....|  |.....|:.::..|..:   .|| ||.:.:
 Worm    21 PEDVEAVVQTPIVPKKSLEMMVEEKKVGSLDDF--ITLRWYCMLVLLMAELT---AFT-ATASSK 79

  Fly    73 CSVEECDLPGSNYYEPHTNWSIPKNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHN 137
            ..|    ..|:|   |..   |...|..|:.|:     ||..:.:..::|..|           .
 Worm    80 VMV----FAGAN---PAV---IGCGGTPLNGCH-----ELAAFRNETNLCEPD-----------L 118

  Fly   138 EFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGILGAV 202
            .:.|:..:|    :|...|:|..|:....|:...|...|..|.|.|:|.:||..::.:..:...:
 Worm   119 RYQFKSVQV----EFNYICEDAKKVKNTITVQTFGVLVGAAIFGQVSDTFGRRKALLISTLGNGL 179

  Fly   203 LGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEVLLAM 267
            ...|.::||...:|:|:..|..:.:..:.....|..:|.:..|.|:...:.||  ::...:|...
 Worm   180 FNWITAYSPDLFYFMVWRTLAGVFTGGVTVVQMVFMVENIPRKDRMWIQNSIT--WSPNLILFPF 242

  Fly   268 SAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNK--RELPES 330
            .|....|||.:..:....|:.......||.||.|||:.:|:.|.|:..|.|....:|  .|..|.
 Worm   243 VAWLCQDWRTMSVVIAASSIATFLACLILEESPRWLIQKGRIEEARKSLIRIRKTDKLYDETFEK 307

  Fly   331 VLDKLVLANRDKLQQSSE--SRFPIREAFKNFKWRIANCSLCWIVHV----LVYYGLSLNVVLLD 389
            .||:::....:|..:||:  .::.....|  ..|::...||.:|..:    .:.|.|..|:..|.
 Worm   308 QLDEVLHVEAEKHARSSKKAKKYTFIHLF--CTWKMIAQSLTFITGITCTTFIVYSLMYNMEKLS 370

  Fly   390 GDKYNNFAYIA--------LVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPV 446
            |..|.|.|.:.        .|.|..:.:|.     |||:       :.:.:..|.|:|.     :
 Worm   371 GSLYWNLAIMGASRWIINIAVSIADYKLPW-----FGRK-------MINQIAMICTLFA-----L 418

  Fly   447 LQLVLFLV----GKL----TITA------SFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLA 497
            |.:.::|.    |:|    |:.|      .|...|...:|:|||.:||..:|..|.|.|.|||.:
 Worm   419 LMIAVYLYFGYNGQLIAIGTVAAVSMCSQLFIAKYMMVNELYPTAVRNLAVSAVSTMSRIGSMFS 483

  Fly   498 PQTPLLAKYYANAP-AMLFAGAAIVSGLLTLFFPETTNVVL 537
            ||...|:.|....| |:||:.......:|:||.|||..|:|
 Worm   484 PQLFYLSDYAEWIPYAVLFSCQLYDFIVLSLFLPETKGVIL 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 133/534 (25%)
MFS 146..530 CDD:119392 106/414 (26%)
str-176NP_001294210.1 2A0119 13..527 CDD:273328 138/561 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162912
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.940

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