DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC22A and Sv2a

DIOPT Version :10

Sequence 1:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_476558.2 Gene:Sv2a / 117559 RGDID:619715 Length:742 Species:Rattus norvegicus


Alignment Length:707 Identity:136/707 - (19%)
Similarity:218/707 - (30%) Gaps:261/707 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAASEAPPADPAVEVAPPAKDSEDVT--LDAILKHLGQFGRFQLIIFLLICLPMMFHA--MFSVT 61
            ::..|.||....  .|...||.|::.  .:.||:..|. ||||..::.::.|.:|...  :|.|.
  Rat   126 LSDGEGPPGGRG--EAQRRKDREELAQQYETILRECGH-GRFQWTLYFVLGLALMADGVEVFVVG 187

  Fly    62 YVFTAATVTHRCSVEECDLPGSNYYEPHTNWSIPKNGKDLDSCNRYTNSELPQWNHSVDICSADH 126
            :|..:|                                                  ..|:|.:| 
  Rat   188 FVLPSA--------------------------------------------------EKDMCLSD- 201

  Fly   127 FTKNKEACAHNEFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSF 191
              .||                               .|:|.|..||...|..:.|.:|||.||..
  Rat   202 --SNK-------------------------------GMLGLIVYLGMMVGAFLWGGLADRLGRRQ 233

  Fly   192 SIALGGILGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITV 256
            .:.:...:.:|.....||...||.||....|..:.........|....|.:..::|....|.:.:
  Rat   234 CLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCM 298

  Fly   257 FYAVGEVLLAM----------------SAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLS 305
            |:.:|.|..|.                ||..||.||:.:.:...||:..:......|||.|:.|.
  Rat   299 FWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLE 363

  Fly   306 QGKEERAKNILRRAAHVNKREL--PESVLD----KLVLANRDKLQQSSES-----RFPIR----- 354
            .||.:.|..:|::....|.|..  ||.|..    |.:....:.::..|::     |:.:|     
  Rat   364 NGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLG 428

  Fly   355 -EAFKNF------KWRIANCSL--CWIVHVLVYYGLS---------------------------- 382
             :.:.||      ::|.....:  .|......||||:                            
  Rat   429 GQVWGNFLSCFSPEYRRITLMMMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVE 493

  Fly   383 ----------------------------------------------------------LNVVLLD 389
                                                                      :|.|..:
  Rat   494 HVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYN 558

  Fly   390 GD----KYNNF------------------------AYI--------ALVEIPGFFMPLLIMDRFG 418
            .|    |:.|.                        ||:        .|..:||..:..|:||:.|
  Rat   559 TDLFEYKFVNSRLVNSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIG 623

  Fly   419 RRYSLCGLMLASGLCCIGTIFT--GADQPVLQLVLFLVGKLTITASFQVLYFFASEIYPTNLRNS 481
            |...|.|   :|.|.|:...|.  |..:..:..:|.|.|.::| ||:..|.....|:||::.|.:
  Rat   624 RLRMLAG---SSVLSCVSCFFLSFGNSESAMIALLCLFGGVSI-ASWNALDVLTVELYPSDKRTT 684

  Fly   482 LLSFCSMMGRFGSMLAPQTPLLAKYYANAPAMLFAGAAIVSG-LLTLFFPETTNVVL 537
            ...|.:.:.:..::|.............|..:|||.||:..| .|.|..|||...||
  Rat   685 AFGFLNALCKLAAVLGISIFTSFVGITKAAPILFASAALALGSSLALKLPETRGQVL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22ANP_649370.1 MFS_SLC22 136..530 CDD:340875 106/559 (19%)
Sv2aNP_476558.2 synapt_SV2 1..742 CDD:130366 136/707 (19%)
Interaction with SYT1 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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