DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mub and HEK2

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_009521.1 Gene:HEK2 / 852248 SGDID:S000000128 Length:381 Species:Saccharomyces cerevisiae


Alignment Length:436 Identity:88/436 - (20%)
Similarity:150/436 - (34%) Gaps:148/436 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NNT--------SSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS 60
            |||        |::.|||.:.......|:..||::..||...|||.||..::|.|..:..||.||
Yeast    16 NNTNGGSSDAGSAATGGAPVVGTTAQPTINHRLLLSLKEAAKIIGTKGSTISRIRAANAVKIGIS 80

  Fly    61 D--GSCPERIVTVSG----TTNAIFSAFTLITKKFEE---------------------------- 91
            :  ..|.:||::.:|    ..|||.....::.|:..|                            
Yeast    81 EKVPGCSDRILSCAGNVINVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKD 145

  Fly    92 ---WCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTER 153
               ...|..|:|.|       ||||..|...|:|||:|:.||.:....|..|..:.:.||.|.||
Yeast   146 EIRDLQQLEDIGYV-------RLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDER 203

  Fly   154 AVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQET 218
            .:.:.|....||..:.:|..::|      :.:..|                |:.:.:|       
Yeast   204 IIEIQGFPGSITNVLIEISEIIL------SDVDVR----------------FSTERSY------- 239

  Fly   219 CPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNP 283
               ||                                  ||::......:|..|           
Yeast   240 ---FP----------------------------------HLKKSSGEPTSPSTS----------- 256

  Fly   284 ASTGGINHTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNT 348
                            ...:.|:.:....:|.|||:|..:|..::..:...|.:...::.:....
Yeast   257 ----------------SNTRIELKIPELYVGAIIGRGMNRIKNLKTFTKTNIVVERKDDDDKDEN 305

  Fly   349 DRTITISGN-PDSVALAQYLI--NMSVELQKANLLEQAQSQQNGGA 391
            .|...|:.. |.:|.||:.::  |::.|::|....::......|.|
Yeast   306 FRKFIITSKFPKNVKLAESMLLKNLNTEIEKRENYKRKLEAAEGDA 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 22/66 (33%)
PCBP_like_KH 109..172 CDD:239089 22/62 (35%)
KH-I 305..368 CDD:238053 14/63 (22%)
HEK2NP_009521.1 KH-I_Rnc1_rpt1 44..113 CDD:411883 22/68 (32%)
KH-I_Rnc1_rpt2 158..226 CDD:411884 24/74 (32%)
KH 257..330 CDD:197652 14/72 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3091
eggNOG 1 0.900 - - E1_KOG2190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.861654 Normalized mean entropy S2056
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001027
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10288
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1164
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.850

Return to query results.
Submit another query.