DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and AT1G14170

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001117282.1 Gene:AT1G14170 / 837976 AraportID:AT1G14170 Length:479 Species:Arabidopsis thaliana


Alignment Length:418 Identity:100/418 - (23%)
Similarity:176/418 - (42%) Gaps:112/418 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTT-------------- 75
            |.:...|:.||||||.|||..:.|.|:.:.:.|::.  .|.||:||:..|.              
plant    47 RYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVC 111

  Fly    76 ---NAIFSAFTLITKKF--EEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 135
               :|:|....::....  ::.....||:|:  |..:.:|::||:.|.|.:|||.|..|:.:|..
plant   112 PALDALFKVHDMVVADADQDDGTDDDNDLGE--KQTVTVRMLVPSDQIGCVIGKGGQVIQNLRND 174

  Fly   136 TGCSIQVASEMLPNSTERAVTLS--------GSAEQITQCIYQICLVMLESPPR--------GAT 184
            |...|:|..:.||..   |:|||        |....:.:.:||:..::.::|.|        .::
plant   175 TNAQIRVIKDHLPAC---ALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSS 236

  Fly   185 IPYRPKPQVTGPVILANGQAFTIQGNYAVPTQETCPVF--PLALATGGLHAGISGLADPLLK--G 245
            ..::|...:....:.::.:.:.::.:.| ..:|.|..|  | |...||:.....|..:.:.:  |
plant   237 SMHQPGAMLMSAALTSSHRNYAVRRDIA-DAREFCVCFICP-AENVGGVIGKGGGFINQIRQETG 299

  Fly   246 AHLQG------------AIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANR 298
            |.::.            .|.:...:..|.|.|                            |.|.|
plant   300 ATIRVNTSETDDDDCIIFISSKEFYEDQSPAV----------------------------NAAIR 336

  Fly   299 AQQQQHE--------------MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE-----RE 344
            .||:..|              :.||:..|||:|||||..|:|:|.::.|.|||...|:     ||
plant   337 LQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 401

  Fly   345 GGNTDRTITISGNPDSV--ALAQYLINM 370
               .:..:.|:|:||:.  ||.|.::.:
plant   402 ---DEEMVQITGSPDAAMKALTQVILRL 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 22/85 (26%)
KH-I_PCBP_rpt2 107..177 CDD:411806 23/77 (30%)
KH-I_PCBP_rpt3 301..371 CDD:411867 29/91 (32%)
AT1G14170NP_001117282.1 KH-I_PEPPER_rpt1_like 43..118 CDD:411887 21/70 (30%)
KH-I 147..219 CDD:469614 23/74 (31%)
KH-I 274..333 CDD:469614 11/87 (13%)
KH-I_PEPPER_rpt2_like 355..427 CDD:411888 27/75 (36%)

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