DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and AT5G15270

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_197031.3 Gene:AT5G15270 / 831379 AraportID:AT5G15270 Length:548 Species:Arabidopsis thaliana


Alignment Length:584 Identity:133/584 - (22%)
Similarity:229/584 - (39%) Gaps:166/584 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EDNNTSSSAGGASIKHE-DPSVTLTI-------RLIMQGKEVGSIIGKKGEIVNRFREESGAKIN 58
            :||      ||:..::. |...:|.|       |.:...|::||:||:.|:||.:.|.::.:||.
plant    26 DDN------GGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIR 84

  Fly    59 ISDG--SCPERIVTV---SGTTNAIFSAFTLITKKFEEWCSQFNDVGKV---------------- 102
            |.:.  .|.||::|:   |..|||                  |.|..||                
plant    85 IGEAIPGCDERVITIYSPSDETNA------------------FGDGEKVLSPAQDALFRIHDRVV 131

  Fly   103 -----------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEM-LP----NST 151
                       |:.|:..:|:||:.|.|.::|:.|..::.||..||..|::..:. :|    ||.
plant   132 ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSD 196

  Fly   152 ERAVTLSGSAEQITQCIYQICLVMLESP-------------PRGATIPYRPKPQVTG--PVILAN 201
            | .:.:||....:.:.:.||...:.|:|             |.|:.:.:...|::.|  |::.:.
plant   197 E-LIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGGYPAGSLMSHAGGPRLVGLAPLMGSY 260

  Fly   202 GQAFTIQGNYAVPTQE---------------TCPVFPLALATGGLHAGISGL-----ADPLLKGA 246
            |:.   .|:::.|..:               ..||..:|...|...|.|:.|     |...:..:
plant   261 GRD---AGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSS 322

  Fly   247 HLQG-----AIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEM 306
            ..:|     .|.|     :::.:.|.:|...    .:..:.|..:..:...:...:...:    :
plant   323 RTEGNDCLITISA-----REVFEDAYSPTIE----AVMRLQPKCSDKVERDSGLVSFTTR----L 374

  Fly   307 TVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVALAQYLIN 369
            .|.:..||||:||||..|.|:|:::.|.|||...|.  :...:.|..:.|||..|  ...:.||.
plant   375 LVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELD--VAKEALIQ 437

  Fly   370 MSVELQKANLLEQAQSQQNGGAAAA--PGAAAAGVAAVTGAAAPTSATNGAITTVTLTSGTGVVG 432
            ::..| :||:.::.      ||.:|  |......||...|......:.:..    .|..|     
plant   438 ITSRL-RANVFDRE------GAVSALMPVLPYVPVAPDAGDRFDYDSRDSR----RLERG----- 486

  Fly   433 AGAAGAAGVANGANPAANGGGSNGTISATGY----ASANGGQATNGSVGVNPAAAAALSSPLAS 492
                         ||...|.||:| :||.||    |...|..:|...|....|:..:.||.|:|
plant   487 -------------NPYPGGYGSSG-VSAEGYSPYGAPVGGSSSTPYGVYGGYASGRSSSSGLSS 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 22/72 (31%)
PCBP_like_KH 109..172 CDD:239089 19/67 (28%)
KH-I 305..368 CDD:238053 22/64 (34%)
AT5G15270NP_197031.3 KH-I_PEPPER_rpt1_like 49..124 CDD:411887 25/92 (27%)
KH-I_PEPPER_rpt2_like 148..219 CDD:411888 20/71 (28%)
KH-I_PEPPER_rpt1_like 283..351 CDD:411887 13/76 (17%)
KH-I_PEPPER_rpt2_like 371..443 CDD:411888 25/78 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I2077
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1137
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10288
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X408
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.920

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