DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and AT5G09560

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001318518.1 Gene:AT5G09560 / 830815 AraportID:AT5G09560 Length:600 Species:Arabidopsis thaliana


Alignment Length:564 Identity:105/564 - (18%)
Similarity:189/564 - (33%) Gaps:180/564 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS----DGSCPERIVTVSGTTNAIF- 79
            |...:|.|::....:.|.:|||.|.:|.:..:.:.:.|.:.    |.| |.||:.:.|...::. 
plant    26 PPEYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDS-PYRIIKIFGHVGSVSR 89

  Fly    80 --------------------------SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQC 118
                                      :.:.|| :.||..     :.|....:.:...|::..|..
plant    90 VKLGVIVNNVSNREKKEQEQEVEVSRAQYALI-RVFEAL-----NFGDCTSSTVSCNLLMEGSHV 148

  Fly   119 GSLIGKSGSKIKEIRQTTGCSIQVASEML---PNSTERAVTLSGSAEQITQCIYQICLVMLESPP 180
            .::|||:|..::.|.:.|||::|:.|..|   .|..:..:.:.|:         ::..||     
plant   149 VTVIGKNGELMQRILEETGCNVQLRSHDLSICTNPGDVVLKIEGN---------RLSAVM----- 199

  Fly   181 RGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGLHAGI-----SGLAD 240
             .|.:....:.|...|:..|:..|..:......|.:.....:......|.||..:     ..|..
plant   200 -KALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDPHGSLHRHVEISQEDALVR 263

  Fly   241 PLLKGAHLQGAI-----PAHHHHL-----QQMPDVAKNPL--------------------ASL-- 273
            |..: ...|..|     |::.|.|     :..|...|.||                    ||:  
plant   264 PFFR-TITQPRIDYLPHPSYDHRLITSASKNPPVTIKQPLQASKDDIRQVDLKILCSNESASVVI 327

  Fly   274 -------AALGLAGMNP------ASTGGINHTANPANRAQQ-------QQHE------------- 305
                   |::.:...:|      .:......|.:..:.:|:       ..:|             
plant   328 KTRSVTDASISVGDRHPDCDERLVTITAFEKTKDITSESQRALVLVFSNMYENATAKVLDSGLTS 392

  Fly   306 -----MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREG--GNTDRTITISGNPDSVAL 363
                 :.|.::.|.|::|:.|.....|:|.:||.|.:.|.|:...  ...::.:.|||...:|..
plant   393 SITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVRE 457

  Fly   364 AQYLINMSVELQKANLLEQAQSQQNGGAAAA-------PG--AAAAGVAAVTG------------ 407
            |   ||....:.:.:|:.  ||.|.|...|.       |.  :..||.....|            
plant   458 A---INQVTSMLREDLIN--QSFQRGSQYAVNYSEDPFPELFSPTAGYTPTFGRSSTMDPNDIFH 517

  Fly   408 --------------AAAPTSATNGA---ITT---VTLTSGTGVV 431
                          .|||.|..:|:   .:|   :.||||...|
plant   518 YSSQASSRLWESPPPAAPRSVNDGSGGLFSTRDDLVLTSGLKTV 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 16/91 (18%)
PCBP_like_KH 109..172 CDD:239089 15/65 (23%)
KH-I 305..368 CDD:238053 18/82 (22%)
AT5G09560NP_001318518.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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