DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and AT2G22600

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_850026.1 Gene:AT2G22600 / 816791 AraportID:AT2G22600 Length:632 Species:Arabidopsis thaliana


Alignment Length:400 Identity:96/400 - (24%)
Similarity:167/400 - (41%) Gaps:85/400 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP-----ERIVT 70
            ||.|.:.:     :..::|......|.||||:|.|:...:.|:||.|::   ..|     ||:||
plant   269 GGNSTERK-----VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISV---GAPLKVSGERVVT 325

  Fly    71 VSGTTNA------IFSAFTLITKKFEEWCSQFNDV----------GKVGKTQIPIRLIVPASQCG 119
            ||...|.      ..:|..|:..:..|     .||          |.:.||    :|:||:....
plant   326 VSARENLESRYSHAQNALALVFARSVE-----IDVEKGLRPGLHNGAIVKT----KLLVPSHFAN 381

  Fly   120 SLIGKSGSKIKEIRQTTGCSIQVASEMLP--NSTERAVTLSGSAEQITQCIYQICLVMLESPPRG 182
            |..| :|::...|.......|.|.:::|.  :..|..:.:.|....:     |..|..:.|..|.
plant   382 SFNG-NGNREAIIATGADVHISVGNQVLEWISENEVVIEIKGEYSHV-----QKALTHVSSKLRE 440

  Fly   183 ATIPYR----PKPQVTGPVILANG--QAFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADP 241
            ..:|.:    .:.:|:.|...|.|  |.:.:|     |:|:.        |:.|....:|. |.|
plant   441 NLLPKKVLGEMRARVSNPYESAGGRSQIYNLQ-----PSQQD--------ASRGDSLSVSA-AVP 491

  Fly   242 LLK----GAH-LQGAIPAHHHHLQQMPD-----VAKNPLASLAALGLAGMNPASTGGINHTANPA 296
            .||    ||. |:.....|...|:::.:     :.::.|......|:..:..:|.|.:: :..|.
plant   492 DLKMVRSGAEVLKSNSVMHTEVLKEVDELNDFTLPQSLLEEDLTQGMKQLQMSSNGDVS-SLPPR 555

  Fly   297 NRAQQQQH---EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNP 358
            ::....:.   |:.|..|.:|.:.|:.||.:..::|||||     |.:.::...|:.|:.|||||
plant   556 SKGVSVRKITLELAVEKDALGSLYGRDGTGVDNLQQISGA-----NVDVKDPTGTEATVLISGNP 615

  Fly   359 DSVALAQYLI 368
            :....|..||
plant   616 EQARTAMSLI 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 22/71 (31%)
PCBP_like_KH 109..172 CDD:239089 13/64 (20%)
KH-I 305..368 CDD:238053 21/62 (34%)
AT2G22600NP_850026.1 PCBP_like_KH 27..86 CDD:239089
KH-I 149..206 CDD:381803
PCBP_like_KH 278..347 CDD:239089 22/71 (31%)
KH 563..629 CDD:197652 22/67 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10288
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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