DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mub and AT2G22600

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_850026.1 Gene:AT2G22600 / 816791 AraportID:AT2G22600 Length:632 Species:Arabidopsis thaliana


Alignment Length:400 Identity:96/400 - (24%)
Similarity:167/400 - (41%) Gaps:85/400 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP-----ERIVT 70
            ||.|.:.:     :..::|......|.||||:|.|:...:.|:||.|::   ..|     ||:||
plant   269 GGNSTERK-----VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISV---GAPLKVSGERVVT 325

  Fly    71 VSGTTNA------IFSAFTLITKKFEEWCSQFNDV----------GKVGKTQIPIRLIVPASQCG 119
            ||...|.      ..:|..|:..:..|     .||          |.:.||    :|:||:....
plant   326 VSARENLESRYSHAQNALALVFARSVE-----IDVEKGLRPGLHNGAIVKT----KLLVPSHFAN 381

  Fly   120 SLIGKSGSKIKEIRQTTGCSIQVASEMLP--NSTERAVTLSGSAEQITQCIYQICLVMLESPPRG 182
            |..| :|::...|.......|.|.:::|.  :..|..:.:.|....:     |..|..:.|..|.
plant   382 SFNG-NGNREAIIATGADVHISVGNQVLEWISENEVVIEIKGEYSHV-----QKALTHVSSKLRE 440

  Fly   183 ATIPYR----PKPQVTGPVILANG--QAFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADP 241
            ..:|.:    .:.:|:.|...|.|  |.:.:|     |:|:.        |:.|....:|. |.|
plant   441 NLLPKKVLGEMRARVSNPYESAGGRSQIYNLQ-----PSQQD--------ASRGDSLSVSA-AVP 491

  Fly   242 LLK----GAH-LQGAIPAHHHHLQQMPD-----VAKNPLASLAALGLAGMNPASTGGINHTANPA 296
            .||    ||. |:.....|...|:::.:     :.::.|......|:..:..:|.|.:: :..|.
plant   492 DLKMVRSGAEVLKSNSVMHTEVLKEVDELNDFTLPQSLLEEDLTQGMKQLQMSSNGDVS-SLPPR 555

  Fly   297 NRAQQQQH---EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNP 358
            ::....:.   |:.|..|.:|.:.|:.||.:..::|||||     |.:.::...|:.|:.|||||
plant   556 SKGVSVRKITLELAVEKDALGSLYGRDGTGVDNLQQISGA-----NVDVKDPTGTEATVLISGNP 615

  Fly   359 DSVALAQYLI 368
            :....|..||
plant   616 EQARTAMSLI 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 22/76 (29%)
KH-I_PCBP_rpt2 107..177 CDD:411806 14/71 (20%)
KH-I_PCBP_rpt3 301..371 CDD:411867 22/70 (31%)
AT2G22600NP_850026.1 KH-I 24..>77 CDD:469614
KH-I 148..210 CDD:469614
KH-I 276..343 CDD:469614 20/74 (27%)
KH-I 371..439 CDD:469614 16/77 (21%)
KH-I_HEN4_like_rpt5 566..629 CDD:411890 22/64 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.