Protein Alignment mub and Nova1

DIOPT Version :10

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: XP_036013454.1
• Gene: Nova1 / 664883
• MGIID: 104297
• Length: 530
• Species: Mus musculus
• Alignment Length: 508
• Identity: 120/508 - (23%)
• Similarity: 185/508 - (36%)
• Gaps: 173/508 - (34%)

  Fly    26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG-----SCPERIVTVSGTTNAIFSAFTLI 85
            :::::.....||||||.|:.:.:.::|:||.|.:|..     ...||:..:.||..|:.:....|
Mouse    52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFI 116

  Fly    86 TKKFEEWCSQFNDVGKVGKT--------------------------------------------- 105
            .:|..|...      .|.||
Mouse   117 AEKIREMPQ------NVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVQ 175

  Fly   106 ------------------QIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP---N 149
                              ||.:::|||.|..|.:|||.|:.:|.|.:.:|..:|::.:  |   |
Mouse   176 YHPLIYTILSQRLCQLEKQILVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK--PDGIN 238

  Fly   150 STERAVTLSGSAEQITQCIYQICLVMLESPPRGA--TIPYRPKPQVTGPVILANGQAFTIQGNYA 212
            ..||.||:||..||..:.:..|...:.|.|..|:  .|.|   ..|||||..:|..        .
Mouse   239 LQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISY---ANVTGPVANSNPT--------G 292

  Fly   213 VPTQETCPVFPLALATGGL--HAGISGLA--DPLLKG---------------------------- 245
            .|...|..|.|.|.|..||  ||.::|:|  ..:|.|
Mouse   293 SPYANTAEVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGL 357

  Fly   246 ----AHLQGAIPAHHHHLQQMPDVAKNPLASLA------------------------ALGLAGMN 282
                |...||:.|        ...:.||.|:.|                        |||.....
Mouse   358 GLSQAAATGALAA--------AAASANPAAAAANLLATYASEASASGSTAGGTAGTFALGSLAAA 414

  Fly   283 PASTGGINHTANP-----------ANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIR 336
            .|:|.|....|:|           :....:...|:.|..:|:|.|:||||..:.|.::::||.|:
Mouse   415 TAATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 479

  Fly   337 ISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLLEQAQSQQNG 389
            ||...|...|..:|.:||:|.|.:...|||||...:..::.  :..|..|:.|
Mouse   480 ISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQG--VRAANPQKVG 530

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	KH-I_PCBP_rpt1	26..92	CDD:411866	19/70 (27%)
		KH-I_PCBP_rpt2	107..177	CDD:411806	25/72 (35%)
		KH-I_PCBP_rpt3	301..371	CDD:411867	27/69 (39%)
Nova1	XP_036013454.1	KH-I_NOVA_rpt1	49..121	CDD:411863	19/68 (28%)
		KH-I_NOVA_rpt2	197..264	CDD:411864	24/68 (35%)
		KH-I_NOVA_rpt3	445..515	CDD:411807	27/69 (39%)