Protein Alignment mub and Fubp1

DIOPT Version :10

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: XP_038959028.1
• Gene: Fubp1 / 654496
• RGDID: 1591892
• Length: 697
• Species: Rattus norvegicus
• Alignment Length: 613
• Identity: 142/613 - (23%)
• Similarity: 202/613 - (32%)
• Gaps: 194/613 - (31%)

  Fly    35 VGSIIGKKGEIVNRFREESGAKINIS--DGSCPERIVTVSGTTNAIFSAFTLITKKFEEWCSQFN 97
            ||.|||:.||.::|.::|||.||.|:  .|..|||...::||..::.||..|:        .|..
  Rat   129 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLL--------DQIV 185

  Fly    98 DVGKV--------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNS-TER 153
            :.|:.        |.......:::|||:.|.:|||.|..||::::..|..:.:..:...|: .::
  Rat   186 EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADK 250

  Fly   154 AVTLSGSAEQITQCIYQICLVMLESP----------------PRGATIPYRPKPQVTGPVILANG 202
            .:.::|...::.|. .::.|.::...                ..|..:|. |:..| |.||..||
  Rat   251 PLRITGDPYKVQQA-KEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI-PRFAV-GIVIGRNG 312

  Fly   203 QAF-TIQGNYAV-----PTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQ 261
            :.. .||.:..|     |...|.|         ...|.|:|..|                 ..|.
  Rat   313 EMIKKIQNDAGVRIQFKPDDGTTP---------DRIAQITGPPD-----------------RCQH 351

  Fly   262 MPDVAKNPLASLAALGLAGMNPASTG-----GINHTANPANRAQQQQHEMTVSNDLIGCIIGKGG 321
            ..::..:.|.|:.|....|..|...|     | |....|....  |:....|.....|.||||||
  Rat   352 AAEIITDLLRSVQAGNPGGPGPGGRGRGRGQG-NWNMGPPGGL--QEFNFIVPTGKTGLIIGKGG 413

  Fly   322 TKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLL------ 380
            ..|..|.|.|||.|.:............:..||.|.|..:..|:.||...:. ...|.|
  Rat   414 ETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG-GPVNPLGPPVPH 477

  Fly   381 -----------------------------------------EQAQSQQNGGAA-------AAPGA 397
                                                     ....:.|..|.|       |.|..
  Rat   478 GPHGVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDP 542

  Fly   398 AAAGVAAVTGAAA-------------PTSATNGAITTVTLTSGTGVVGAGAAGAAGVANGANPAA 449
            |.||....:.|.|             |.:|..||.|| |.|:|.|..|          :..|||.
  Rat   543 AKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTT-TQTNGQGNYG----------DQQNPAP 596

  Fly   450 NGGGSNGTISATGYASA------NGGQATNGSVGVNP-----------------AAAAALSSPLA 491
            .|        ...|..|      ..|||.....|..|                 ||..|.:||..
  Rat   597 AG--------QVDYTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQG 653

  Fly   492 -----SALQLLTKPGAL-SALSNLSALD 513
                 .|.|.|.:|..| ||..:.||.|
  Rat   654 MPQHPPAPQCLPRPSTLGSAAKSNSAED 681

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	KH-I_PCBP_rpt1	26..92	CDD:411866	23/58 (40%)
		KH-I_PCBP_rpt2	107..177	CDD:411806	15/70 (21%)
		KH-I_PCBP_rpt3	301..371	CDD:411867	23/69 (33%)
Fubp1	XP_038959028.1	KH-I_FUBP1_rpt1	115..189	CDD:411906	24/67 (36%)
		KH-I_FUBP1_rpt2	203..272	CDD:411909	15/69 (22%)
		KH-I_FUBP1_rpt3	293..360	CDD:411912	20/94 (21%)
		KH-I_FUBP1_rpt4	393..464	CDD:411915	23/72 (32%)
		DUF1897	628..>642	CDD:462653	0/13 (0%)