DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and Pcbp3

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001416230.1 Gene:Pcbp3 / 59093 MGIID:1890470 Length:394 Species:Mus musculus


Alignment Length:397 Identity:194/397 - (48%)
Similarity:241/397 - (60%) Gaps:89/397 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSG 73
            |.||.       :|||||||:|.|||||||||||||.|.:.||||||:||||:|:|||||||::|
Mouse    38 SEGGL-------NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITG 95

  Fly    74 TTNAIFSAFTLITKKFEE-WCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
            .|:|||.||.:|..|||| ..:..::.....|..:.:||:||||||||||||.||||||||::||
Mouse    96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160

  Fly   138 CSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANG 202
            ..:|||.:|||||||||||:||:.:.|.||:.|||:|||||||:||||||||||..| |||.|.|
Mouse   161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST-PVIFAGG 224

  Fly   203 Q-----------------------AFTIQGNYAVP------------TQETCPVFPLALATGGLH 232
            |                       |:||||.||:|            .|:| |..||        
Mouse   225 QVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDQLTKLHQLAMQQT-PFPPL-------- 280

  Fly   233 AGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPAN 297
                |..:|...|..|    |.|      ..:.|:|.:..  :.||....||||           
Mouse   281 ----GQTNPAFPGEKL----PLH------SSEEAQNLMGQ--SSGLDASPPAST----------- 318

  Fly   298 RAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVA 362
                  ||:|:.|||||||||:.||||.||||:|||.|:|:|..|   |:::|.|||:|.|.:::
Mouse   319 ------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANIS 374

  Fly   363 LAQYLIN 369
            |||||||
Mouse   375 LAQYLIN 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 48/66 (73%)
KH-I_PCBP_rpt2 107..177 CDD:411806 48/69 (70%)
KH-I_PCBP_rpt3 301..371 CDD:411867 41/69 (59%)
Pcbp3NP_001416230.1 None

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