Protein Alignment mub and Pcbp4

DIOPT Version :10

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: NP_067542.3
• Gene: Pcbp4 / 59092
• MGIID: 1890471
• Length: 403
• Species: Mus musculus
• Alignment Length: 476
• Identity: 195/476 - (40%)
• Similarity: 265/476 - (55%)
• Gaps: 95/476 - (19%)

  Fly     6 TSSSAGGASIKHEDP--SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERI 68
            :||.||    ..|.|  |:|||:|::|.|||||||||||||.|.|.||:|.|:|.||:|||||||
Mouse     2 SSSDAG----LEEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERI 62

  Fly    69 VTVSGTTNAIFSAFTLITKKF-EEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
            .|::|:|.|:|.|.::|..|. |:.|:...:.|.|.:..:.:||::|||||||||||:|:|||||
Mouse    63 TTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI 127

  Fly   133 RQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPV 197
            |:|||..:|||.::||||||||||:||..:.|..|:.|||.|:|||||:||||||.|...: |.|
Mouse   128 RETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSL-GTV 191

  Fly   198 ILANGQAFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQM 262
            :|:..|.|::||.|...|                                     ||....|||:
Mouse   192 LLSANQGFSVQGQYGAVT-------------------------------------PAEVTKLQQL 219

  Fly   263 PDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEI 327
            ...|. |.||.:.  :.|::|::              |....|..|.||||||:||:.|:||:||
Mouse   220 SGHAV-PFASPSV--VPGLDPST--------------QTSSQEFLVPNDLIGCVIGRQGSKISEI 267

  Fly   328 RQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLLEQAQSQQNGGAA 392
            ||:|||.|:|.|..|..|   :|.:||:|:|.|:|||||||...:|..|:.         :||
Mouse   268 RQMSGAHIKIGNQAEGAG---ERHVTITGSPVSIALAQYLITACLETAKST---------SGG-- 318

  Fly   393 AAPGAAAAGVAAVTGAAAPTSATNGAITTVTLTSGTGVVGAGAA-------GAAGVANGANPAAN 450
             .||:|.|.:.  |..:.|.:|..        |:..|::|...|       |...|...|.|.|:
Mouse   319 -TPGSAPADLP--TPFSPPLTALP--------TAPPGLLGTPYAISLSNFIGLKPVPFLALPPAS 372

  Fly   451 GGGSNGTISATG-YASANGGQ 470
            .|...|..:.|. .|:|||.:
Mouse   373 PGPPPGLAAYTAKMAAANGSK 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	KH-I_PCBP_rpt1	26..92	CDD:411866	40/66 (61%)
		KH-I_PCBP_rpt2	107..177	CDD:411806	44/69 (64%)
		KH-I_PCBP_rpt3	301..371	CDD:411867	38/69 (55%)
Pcbp4	NP_067542.3	KH-I_PCBP4_rpt1	17..86	CDD:411945	42/68 (62%)
		KH-I_PCBP4_rpt2	101..172	CDD:411948	44/70 (63%)
		KH-I_PCBP4_rpt3	241..308	CDD:411951	38/69 (55%)