Protein Alignment mub and khsrp

DIOPT Version :10

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: NP_001082897.2
• Gene: khsrp / 573145
• ZFINID: ZDB-GENE-030131-4357
• Length: 666
• Species: Danio rerio
• Alignment Length: 640
• Identity: 138/640 - (21%)
• Similarity: 208/640 - (32%)
• Gaps: 196/640 - (30%)

  Fly     1 MEDNNTSSSAGGASIKHEDPSVTLTIRLIMQGKE-----------------VGSIIGKKGEIVNR 48
            :||.:...|...||.:....::::..:|....|:                 ||.|||:.||.:|:
Zfish    67 LEDGDQPESKKMASDRDNAAALSIGAQLAALSKQSVRPSSMTEEYRVPDGMVGLIIGRGGEQINK 131

  Fly    49 FREESGAKINIS--DGSCPERIVTVSGTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPI-- 109
            .:::||.|:.|:  .|..|:|.|:::|...||..|..::           :|:...|:...|.
Zfish   132 IQQDSGCKVQIAPDSGGLPDRSVSITGGPEAIQKAKMML-----------DDIVSRGRGTPPSFH 185

  Fly   110 ----------RLIVPASQCGSLIGKSGSKIKEIRQTTGCS---IQVASEMLPNSTERAVTLSGSA 161
                      .:::||.:.|.:|||.|..||::::..|..   ||.||:. || .::.:.:.|..
Zfish   186 ESTNGSGHMQEMVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQG-PN-MDKPLRIIGDP 248

  Fly   162 EQITQCIYQICLVMLE--------------------------SPPRGATIPYRPKPQVTGPVILA 200
            .::.|....:..::.|                          ....|..:|. |:..| |.||..
Zfish   249 YKVQQAREMVQEILRERDHPGFERNEYGSRMGGGGGGGGGGGGGGGGIEVPV-PRHSV-GVVIGR 311

  Fly   201 NGQAF-TIQGNYAV-----PTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHL 259
            :|:.. .||.:..|     |...|.|.                      |.||:.|. |....|
Zfish   312 SGEMIKKIQNDAGVRIQFKPDDGTGPD----------------------KIAHIMGP-PDRCEH- 352

  Fly   260 QQMPDVAKNPLASLAALGLAGMNPAS-------TGGINHTANP-ANRAQQQQHEMTVS--NDLIG 314
              ...:....|.|:......|..|..       .||......| .|.......|||.|  ....|
Zfish   353 --AASIINELLQSIRVREEGGGGPPGPPGTGMPPGGRGRGRGPGGNWGGPPGSEMTFSIPAHKCG 415

  Fly   315 CIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVE------ 373
            .:||:||..:..|.|.:||.:.||......|....:..||.|:|..:..|:.||...:|
Zfish   416 LVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQLIEDKIEGPLCPV 480

  Fly   374 --------------------LQK--------------------ANLLEQ---------------- 382
                                .|.                    .|..:|
Zfish   481 GPGPGGPGPAGPMGPYNPNPYQPGPPGGPPHGGPPGGQYPQGWGNAYQQWQPHDPSKAATDPNAA 545

  Fly   383 -----AQSQQNGGAAAAPGAAAAGVAAVTGAAAPTSATNGA----ITTVTLTSGTGVVGAGAAGA 438
                 ||..|..|.||.||...|...|..|.|..:.|..||    .|.........:..||...|
Zfish   546 WAAYYAQYYQQPGGAAMPGQTPAAQPAAPGPADQSQAAPGAAQPDYTKAWEEYYKKMAAAGGGAA 610

  Fly   439 AGVANGANPAANGGGSNGTISATGYA------SANGGQA--TNGSVGVNPAAAAA 485
            ...|.||.||.....:..|..:..:|      :|..||.  |.|..|..|....|
Zfish   611 PAAAGGAQPAGAAAAAGQTDYSAAWAEYYRQQAAYYGQTGQTPGQPGATPQGQQA 665

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	KH-I_PCBP_rpt1	26..92	CDD:411866	22/84 (26%)
		KH-I_PCBP_rpt2	107..177	CDD:411806	19/84 (23%)
		KH-I_PCBP_rpt3	301..371	CDD:411867	23/71 (32%)
khsrp	NP_001082897.2	KH-I_FUBP2_rpt1	107..177	CDD:411907	21/80 (26%)
		KH-I_FUBP2_rpt2	192..264	CDD:411910	18/73 (25%)
		KH-I_FUBP2_rpt3	296..361	CDD:411913	19/92 (21%)
		KH-I_FUBP2_rpt4	404..472	CDD:411916	23/67 (34%)