DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and PCBP4

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:XP_024309446.1 Gene:PCBP4 / 57060 HGNCID:8652 Length:481 Species:Homo sapiens


Alignment Length:630 Identity:202/630 - (32%)
Similarity:268/630 - (42%) Gaps:236/630 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSSAGGASIKHEDP--SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIV 69
            |.|.||.   .|:|  |:|||:|::|.|||||||||||||.|.|.||:|.|:|.||:|||||||.
Human    25 SGSDGGL---EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERIT 86

  Fly    70 TVSGTTNAIFSAFTLITKKF-EEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
            |::|:|.|:|.|.::|..|. |:.|:...:.|.|.:..:.:||::|||||||||||:|:||||||
Human    87 TITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 151

  Fly   134 -------------------------------------------------------QTTGCSIQVA 143
                                                                   ||||..:|||
Human   152 EVRGEIYHPQGIRGKGAVVRGVLGLWRPPHLESSEPGQPFSGLWEQPEVAPVLCLQTTGAQVQVA 216

  Fly   144 SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQ 208
            .::||||||||||:||..:.|..|:.|||.|:|||||:||||||.|...: |.|:|:..|.|::|
Human   217 GDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSL-GTVLLSANQGFSVQ 280

  Fly   209 GNYAVPTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASL 273
            |.|...|                                     ||....|||:...|. |.|:.
Human   281 GQYGAVT-------------------------------------PAEVTKLQQLSSHAV-PFATP 307

  Fly   274 AALGLAGMNPASTGGINHTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRIS 338
            :.  :.|::|.:              |....|..|.||||||:||:.|:||:||||:|||.|:|.
Human   308 SV--VPGLDPGT--------------QTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG 356

  Fly   339 NCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLLEQAQSQQNGGAAAAPGAAAAGVA 403
            |..|..|   :|.:||:|:|.|:|||||||...:|..|:                          
Human   357 NQAEGAG---ERHVTITGSPVSIALAQYLITACLETAKS-------------------------- 392

  Fly   404 AVTGAAAPTSATNGAITTVTLTSGTGVVGAGAAGAAGVANGANPAANGGGSNGTISATGYASANG 468
              |....|:||                                                      
Human   393 --TSGGTPSSA------------------------------------------------------ 401

  Fly   469 GQATNGSVGVNPAAAAALSSPLASALQ-----LLTKPGALSALSNLSALDLLNLTTLGNTNGAGA 528
                       ||...|..||..:||.     ||..|.|:| |||...|..:....|     ..|
Human   402 -----------PADLPAPFSPPLTALPTAPPGLLGTPYAIS-LSNFIGLKPMPFLAL-----PPA 449

  Fly   529 NPGGPPVQTTGVNRAKGHYATSRFRQHQTETGGEAEKPRNKFNPY 573
            :||.||             ..:.:........|..:..|.||:||
Human   450 SPGPPP-------------GLAAYTAKMAAANGSKKAERQKFSPY 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 38/60 (63%)
PCBP_like_KH 109..172 CDD:239089 42/117 (36%)
KH-I 305..368 CDD:238053 36/62 (58%)
PCBP4XP_024309446.1 PCBP_like_KH 42..103 CDD:239089 38/60 (63%)
PCBP_like_KH 126..245 CDD:239089 42/118 (36%)
KH_1 321..385 CDD:306517 38/66 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141638
Domainoid 1 1.000 97 1.000 Domainoid score I7245
eggNOG 1 0.900 - - E1_KOG2190
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 328 1.000 Inparanoid score I2465
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52907
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001027
OrthoInspector 1 1.000 - - otm40928
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10288
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1164
SonicParanoid 1 1.000 - - X408
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.890

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