DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and PCBP2

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_005007.2 Gene:PCBP2 / 5094 HGNCID:8648 Length:366 Species:Homo sapiens


Alignment Length:410 Identity:179/410 - (43%)
Similarity:234/410 - (57%) Gaps:90/410 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLI 85
            :|||||||:|.|||||||||||||.|.:.||||||:||||:|:|||||:|::|.|||||.||.:|
Human    11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMI 75

  Fly    86 TKKFEE-WCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPN 149
            ..|.|| ..|...:.....:..:.:||:||||||||||||.|.||||||::||..:|||.:||||
Human    76 IDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 140

  Fly   150 STERAVTLSGSAEQITQCIYQICLVMLE----SPPRGATIPYRPKPQVTGPVILANGQ------- 203
            |||||:|::|..:.|.:|:.|||:||||    |||:|.||||||||. :.|||.|.||       
Human   141 STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPS-SSPVIFAGGQDRYSTGS 204

  Fly   204 ------------------------AFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLK 244
                                    |:||||.||:|..:...:..||:.                 
Human   205 DSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ----------------- 252

  Fly   245 GAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTVS 309
                |...|..|.:                 .|.:|:..:|.....:.|.....||...||:|:.
Human   253 ----QSHFPMTHGN-----------------TGFSGIESSSPEVKGYWAGLDASAQTTSHELTIP 296

  Fly   310 NDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVEL 374
            |||||||||:.|.||.||||:|||.|:|:|..|   |:|||.:||:|:..|::|||||||:.:  
Human   297 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLAQYLINVRL-- 356

  Fly   375 QKANLLEQAQSQQNGGAAAA 394
                      |.:.||..::
Human   357 ----------SSETGGMGSS 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 47/66 (71%)
KH-I_PCBP_rpt2 107..177 CDD:411806 44/69 (64%)
KH-I_PCBP_rpt3 301..371 CDD:411867 41/69 (59%)
PCBP2NP_005007.2 KH-I_PCBP1_2_rpt1 13..82 CDD:411943 49/68 (72%)
KH-I_PCBP1_2_rpt2 92..169 CDD:411946 45/76 (59%)
KH-I_PCBP1_2_rpt3 285..360 CDD:411949 44/89 (49%)

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