DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and fubp1

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:XP_068079736.1 Gene:fubp1 / 406418 ZFINID:ZDB-GENE-040426-2159 Length:670 Species:Danio rerio


Alignment Length:566 Identity:136/566 - (24%)
Similarity:198/566 - (34%) Gaps:161/566 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VGSIIGKKGEIVNRFREESGAKINIS--DGSCPERIVTVSGTTNAIFSAFTLITKKFEEW----C 93
            ||.|||:.||.::|.::|||.||.|:  .|..|:|.||::|:.:||.:|..|:::..|:.    .
Zfish   101 VGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGSPDAIMTAKRLLSEIVEKGRPSPA 165

  Fly    94 SQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNS-TERAVTL 157
            ...||    |.......:::|||:.|.:|||.|..||::::..|..:.:..:...|: .::.:.:
Zfish   166 FHHND----GPGMSVHEMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRI 226

  Fly   158 SGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQ-GNYA--------- 212
            ||...::.|.                      |..|   :.|...|.|..| |.|.         
Zfish   227 SGDPFKVQQA----------------------KDMV---MDLIRDQGFREQRGEYGSRAGGGGGG 266

  Fly   213 -----VPTQETCPVFPLALATGGLHAGISGLADPLLK------GAHLQ-----GAIPAHHHHLQQ 261
                 ||.    |.|.:     |:..|.||   .::|      |..:|     |:.|.....:..
Zfish   267 GESLDVPV----PRFAV-----GIVIGRSG---EMIKKIQNDTGVRIQFKPDDGSTPERIAQIMG 319

  Fly   262 MPDVAKNP-------LASLAALGLAGMNPASTGG----------INHTANPANRAQQQQHEMTVS 309
            .||.|::.       |.|:.|.|..|......||          .|....|....  |:...||.
Zfish   320 PPDRAQHAADIITDLLRSVQAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGGL--QEFTFTVP 382

  Fly   310 NDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTI---TISGNPDSVALAQYLINMS 371
            ....|.||||||..|..|.|.|||.|.:   :.....|:|..|   |:.|:|..:..|:.|:...
Zfish   383 TMKTGLIIGKGGETIKNISQQSGARIEL---QRNPPPNSDPNIKIFTVRGSPQQIDYARQLVEEK 444

  Fly   372 VELQKANLLEQAQSQQNGGAAAAP---GAAAAGVAAVTGAAAPTSATNGAITTVTLTSGTGVVGA 433
            :         .......||....|   |..:.|.....|..||....|           .|..|.
Zfish   445 I---------GGPVSPMGGPHGPPGPHGGPSHGPPGPQGPPAPMGPYN-----------PGPYGQ 489

  Fly   434 GAAGAAGVANGANPAANGGG--------SNGTISATGYASANGGQATNGSVGVNPAAAAALSS-- 488
            |..|..|......|...|.|        .:.|:.:...|:|:          .|.||.||..|  
Zfish   490 GPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPTVCSPDKAAAD----------ANAAAWAAYYSQY 544

  Fly   489 ---PLASALQLLTKPGALSALSNLSALDLLNLTTLGNTNGAGANPG 531
               |..........||                ||..|..|....||
Zfish   545 QQQPQGPMTPTSAAPG----------------TTQANGQGDPQAPG 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 25/58 (43%)
KH-I_PCBP_rpt2 107..177 CDD:411806 15/70 (21%)
KH-I_PCBP_rpt3 301..371 CDD:411867 25/72 (35%)
fubp1XP_068079736.1 KH-I_FUBP_rpt1 90..157 CDD:411824 24/55 (44%)
KH-I_FUBP1_rpt2 174..244 CDD:411909 17/94 (18%)
KH-I_FUBP1_rpt3 268..335 CDD:411912 16/78 (21%)
KH-I_FUBP1_rpt4 374..445 CDD:411915 25/75 (33%)
DUF1897 633..>648 CDD:462653
Blue background indicates that the domain is not in the aligned region.

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