DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and hnrpkl

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_998156.3 Gene:hnrpkl / 406264 ZFINID:ZDB-GENE-040426-1923 Length:431 Species:Danio rerio


Alignment Length:411 Identity:112/411 - (27%)
Similarity:180/411 - (43%) Gaps:77/411 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFS 80
            ::.|..|.|  |:::|.|..|::|||.|:.:...|.:..|.:::.|.|.||||::||...:.|..
Zfish    38 RNTDEMVEL--RVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADIDTIGE 100

  Fly    81 AFTLITKKFEEW---------CSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTT 136
            ....|....||:         |.              :||::..|..|.:||..|:||||:|:.|
Zfish   101 ILLKIIPTLEEYQHYSGTDFDCE--------------LRLLIHQSLAGGIIGVKGAKIKELRENT 151

  Fly   137 GCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRP------------ 189
            ..:|::..|..|:||:|.|.:.|..|::.:||..|..::.|:|.:|...||.|            
Zfish   152 QTTIKLFQECCPHSTDRVVLVGGKPERVVECIKVILELIAEAPIKGRAQPYDPNFYDETYDYGGF 216

  Fly   190 ---------KPQVTGPVILANG--QAFTIQGNYAVPTQE-----------TCPVFPLALATGGLH 232
                     :|....|:....|  :....:|:.:||...           ..|..|.....||..
Zfish   217 TMMYEERGRRPMGGFPMRGRGGFDRMPPGRGSRSVPPSRRDYDDMSPRRGPPPPPPGRGGRGGSR 281

  Fly   233 AGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAK----NPLASLAALGL---AGMNPASTGG-- 288
            |....|..|.......:.:..::|.::...|:..:    :...|::..|.   :...|..:||  
Zfish   282 ARNLPLPPPPPPRGGDRFSHQSYHSNMDDRPNDRRGRPGDRYESMSGGGYDNNSSWEPFQSGGRG 346

  Fly   289 -INHTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTI 352
             .:....|....|     :|:..||.|.||||||.:|.:||..|||.|:|   :|...|:.||.|
Zfish   347 SYSDIGGPVITTQ-----VTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSEDRII 403

  Fly   353 TISGNPDSVALAQYLINMSVE 373
            ||:|..|.:..||||:..||:
Zfish   404 TITGTQDQIQNAQYLLQNSVK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 19/60 (32%)
PCBP_like_KH 109..172 CDD:239089 24/62 (39%)
KH-I 305..368 CDD:238053 30/62 (48%)
hnrpklNP_998156.3 ROKNT 10..44 CDD:285329 1/5 (20%)
PCBP_like_KH 45..106 CDD:239089 20/62 (32%)
PCBP_like_KH 123..187 CDD:239089 24/77 (31%)
KH-I 357..420 CDD:238053 32/70 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394765at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1164
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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