DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and hnrnpk

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_989327.1 Gene:hnrnpk / 394952 XenbaseID:XB-GENE-6258484 Length:399 Species:Xenopus tropicalis


Alignment Length:403 Identity:110/403 - (27%)
Similarity:171/403 - (42%) Gaps:90/403 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFS 80
            :..:..:.:.:|:::|.|..|::|||.|:.:...|.:..|.:::.|.|.||||:::|.....|..
 Frog    32 RSRNTDMMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIETIGE 96

  Fly    81 AFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVA 143
            ....|....||: ..|  ||.      ...:||::..|..|.:||..|:||||:|:.|..:|::.
 Frog    97 ILKKIIPTLEEY-QHFKGNDF------DCELRLLIHQSLAGGIIGVKGAKIKELREKTQTTIKLF 154

  Fly   144 SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRP------------------- 189
            .|..|:||:|.|.:.|..:::.:||..|..::.|||.:|.:.||.|                   
 Frog   155 QECCPHSTDRVVLIGGKPDRVVECIKVILDLISESPVKGRSQPYDPNFYDETYDYGGFTMMFDDR 219

  Fly   190 --KPQVTGPVILANGQAFTIQGNY---------------------AVPTQETCPVFPLALATGGL 231
              :|.         |.....:|.:                     ..|.:...|..|.....||.
 Frog   220 RGRPM---------GFPMHARGGFDRMPPGPGGRPLPQSRRDYDDMSPRRGPLPPPPGRGGRGGS 275

  Fly   232 HAGISGL-ADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANP 295
            .|....| ..|..:|...:|. |.|:.                 .:|.||....|.|.|   ..|
 Frog   276 RARNLPLPPPPPPRGGDRRGR-PDHYD-----------------GMGGAGYGRGSFGDI---GGP 319

  Fly   296 ANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDS 360
            ....|     :|:..||.|.||||||.:|.:||..|||.|:|   :|...|:.||.|||:|..|.
 Frog   320 VITTQ-----VTIPKDLAGSIIGKGGQRIKQIRHESGASIKI---DEPLEGSDDRIITITGTQDQ 376

  Fly   361 VALAQYLINMSVE 373
            :..||:|:..||:
 Frog   377 IQNAQFLLQNSVK 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 20/65 (31%)
KH-I_PCBP_rpt2 107..177 CDD:411806 24/69 (35%)
KH-I_PCBP_rpt3 301..371 CDD:411867 30/69 (43%)
hnrnpkNP_989327.1 ROKNT 4..40 CDD:429813 0/7 (0%)
KH-I_HNRNPK_rpt1 39..102 CDD:411860 18/62 (29%)
KH-I_HNRNPK_rpt2 117..186 CDD:411861 24/68 (35%)
KH-I_HNRNPK_rpt3 320..393 CDD:411862 33/78 (42%)

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