Protein Alignment mub and Pcbp2

DIOPT Version :9

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: XP_017450492.1
• Gene: Pcbp2 / 363005
• RGDID: 1309626
• Length: 471
• Species: Rattus norvegicus
• Alignment Length: 599
• Identity: 214/599 - (35%)
• Similarity: 289/599 - (48%)
• Gaps: 184/599 - (30%)

  Fly    21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIFSAFTLI 85
            :|||||||:|.|||||||||||||.|.:.||||||:||||:|:|||||:|::|.|||||.||.:|
  Rat    11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMI 75

  Fly    86 TKKFEE-WCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPN 149
            ..|.|| ..|...:.....:..:.:||:||||||||||||.|.||||||::||..:|||.:||||
  Rat    76 IDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 140

  Fly   150 STERAVTLSGSAEQITQCIYQICLVMLE----SPPRGATIPYRPKPQVTGPVILANGQ------- 203
            |||||:|::|..:.|.:|:.|||:||||    |||:|.||||||||. :.|||.|.||
  Rat   141 STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPS-SSPVIFAGGQDRYSTGS 204

  Fly   204 ------------------------AFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLK 244
                                    |:||||.||:|..:...:..||:.
  Rat   205 DSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ----------------- 252

  Fly   245 GAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTVS 309
                |...|..|.:                 .|.:|:..:|.....:.|.....||...||:|:.
  Rat   253 ----QSHFPMTHGN-----------------TGFSGIESSSPEVKGYWAGLDASAQTTSHELTIP 296

  Fly   310 NDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVEL 374
            |||||||||:.|.||.||||:|||.|:|:|..|   |:|||.:||:|:..|::|||||||:|:|
  Rat   297 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE---GSTDRQVTITGSAASISLAQYLINVSLE- 357

  Fly   375 QKANLLEQAQSQQNGGAAAAPGAAAAGVAA-------VTGAAAPTSATNGAITTVTL-TSGTGVV 431
                             .|.|.:.||.|..       ::..:.|:|:::.:.||.:| |:||.
  Rat   358 -----------------NAKPSSQAASVTIPDHLSINLSQPSTPSSSSSSSTTTPSLATAGTS-- 403

  Fly   432 GAGAAGAAGVANGANPAANGGGSNGTISATGYASANGGQATNGSVGVNPAAAAALSSPLASALQL 496
                                                             .|.::|.:||.:|
  Rat   404 -------------------------------------------------DAPSSLPNPLPTA--- 416

  Fly   497 LTKPGALSALSNLSALDLLNLTTLGNTNGAGANPGGPPVQTTG--VNRAKGHYATSRFRQHQTET 559
                ..:|:|..:..:.||.|..:....|.||:.......|..  .|:.||
  Rat   417 ----PCVSSLLGMKPIPLLALNVVSAAKGTGASATTTTTSTVPCVTNKLKG-------------- 463

  Fly   560 GGEAEKPRNKFNPY 573
                ||.|  |:||
  Rat   464 ----EKQR--FSPY 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	PCBP_like_KH	25..86	CDD:239089	44/60 (73%)
		PCBP_like_KH	109..172	CDD:239089	40/62 (65%)
		KH-I	305..368	CDD:238053	37/62 (60%)
Pcbp2	XP_017450492.1	KH-I_PCBP1_2_rpt1	13..82	CDD:411943	49/68 (72%)
		KH-I_PCBP1_2_rpt2	92..169	CDD:411946	45/76 (59%)
		KH-I_PCBP1_2_rpt3	285..360	CDD:411949	45/95 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335331
Domainoid	1	1.000	97	1.000	Domainoid score	I7059
eggNOG	1	0.900	-	-		E1_KOG2190
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	324	1.000	Inparanoid score	I2405
OMA	1	1.010	-	-		QHG52907
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001027
OrthoInspector	1	1.000	-	-		otm45064
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10288
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X408
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	12	11.860