Protein Alignment mub and Fubp3

DIOPT Version :10

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: NP_001421220.1
• Gene: Fubp3 / 362106
• RGDID: 1307004
• Length: 575
• Species: Rattus norvegicus
• Alignment Length: 434
• Identity: 107/434 - (24%)
• Similarity: 167/434 - (38%)
• Gaps: 98/434 - (22%)

  Fly     3 DNNTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CP 65
            |:...:..|  ::.|:...:|...:  :..|.||.|||:.||.::|.:.|||.||.|:..|  .|
  Rat    61 DDGVGNQLG--ALVHQRAVITEEFK--VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP 121

  Fly    66 ERIVTVSGTTNAIFSAFTLITKKFEEWCSQ----FNDVGKVGKTQIPIRLIVPASQCGSLIGKSG 126
            ||...::||..:|..|..|:.:..:. |..    .||:.  |.:.|. .|::|||:.|.:|||.|
  Rat   122 ERPCVLTGTPESIEQAKRLLGQIVDR-CRNGPGFHNDID--GNSTIQ-ELLIPASKVGLVIGKGG 182

  Fly   127 SKIKEIRQTTGCS-IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLE------------- 177
            ..||::::.||.. :.:....||...::.:.::|...::.|....:..::.|
  Rat   183 ETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRSDF 247

  Fly   178 -SPPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADP 241
             |...|.:|.......|.|.||..||:......|.|
  Rat   248 TSRAGGGSIEVSVPRFVVGIVIGRNGEMIKKIQNDA----------------------------- 283

  Fly   242 LLKGAHLQ-----GAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQ 301
               |..:|     |..|.....:...||..::....:..|.|........||:..|.........
  Rat   284 ---GVRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELILTAQEREILGGLTGTRGRGRGRGD 345

  Fly   302 ---------QQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTD---RTITI 354
                     |:...||..|..|.:|||||..|..|.|.|||.:.:   :.....|||   |..||
  Rat   346 WSVGTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVEL---QRNPPPNTDPNLRIFTI 407

  Fly   355 SGNPDSVALAQYLINMSVELQKANLLEQAQSQQNGGAA-AAPGA 397
            .|.|..:.:|::||:..|                |||: .||.|
  Rat   408 RGAPQQIEVARHLIDEKV----------------GGASLGAPTA 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	KH-I_PCBP_rpt1	26..92	CDD:411866	24/67 (36%)
		KH-I_PCBP_rpt2	107..177	CDD:411806	18/70 (26%)
		KH-I_PCBP_rpt3	301..371	CDD:411867	27/81 (33%)
Fubp3	NP_001421220.1	KH-I_FUBP3_rpt1	78..148	CDD:411908	25/72 (35%)
		KH-I_FUBP3_rpt2	159..241	CDD:411911	20/84 (24%)
		KH-I_FUBP3_rpt3	252..321	CDD:411914	16/100 (16%)
		KH-I_FUBP3_rpt4	356..424	CDD:411917	26/70 (37%)