DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and Fubp3

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001028561.2 Gene:Fubp3 / 320267 MGIID:2443699 Length:575 Species:Mus musculus


Alignment Length:436 Identity:108/436 - (24%)
Similarity:168/436 - (38%) Gaps:99/436 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DNNTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGS--CP 65
            |:...:..|  ::.|:...:|...:  :..|.||.|||:.||.::|.:.|||.||.|:..|  .|
Mouse    61 DDGVGNQLG--ALVHQRAVITEEFK--VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP 121

  Fly    66 ERIVTVSGTTNAIFSAFTLITKKFEEWCSQ----FNDVGKVGKTQIPIRLIVPASQCGSLIGKSG 126
            ||...::||..:|..|..|:.:..:. |..    .||:.  |.:.|. .|::|||:.|.:|||.|
Mouse   122 ERPCVLTGTPESIEQAKRLLGQIVDR-CRNGPGFHNDMD--GNSTIQ-ELLIPASKVGLVIGKGG 182

  Fly   127 SKIKEIRQTTGCS-IQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLE------------- 177
            ..||::::.||.. :.:....||...::.:.::|...::.|....:..::.|             
Mouse   183 ETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRGVRSDF 247

  Fly   178 -SPPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADP 241
             |...|.:|.......|.|.||..||:......|.|                             
Mouse   248 TSRAGGGSIEVSVPRFVVGIVIGRNGEMIKKIQNDA----------------------------- 283

  Fly   242 LLKGAHLQ-----GAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQ 301
               |..:|     |..|.....:...||..::....:..|.|........||:..|.........
Mouse   284 ---GVRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELILTAQEREILGGLTVTRGRGRGRSD 345

  Fly   302 ---------QQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTD---RTITI 354
                     |:...||..|..|.:|||||..|..|.|.|||.:.:   :.....|||   |..||
Mouse   346 WSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVEL---QRNPPPNTDPNLRIFTI 407

  Fly   355 SGNPDSVALAQYLINMSVELQKANLLEQAQSQQNGGAAAAPGAAAA 400
            .|.|..:.:|::||:..|                |||:.  ||.||
Mouse   408 RGAPQQMEVARHLIDEKV----------------GGASL--GAPAA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 24/67 (36%)
KH-I_PCBP_rpt2 107..177 CDD:411806 18/70 (26%)
KH-I_PCBP_rpt3 301..371 CDD:411867 27/81 (33%)
Fubp3NP_001028561.2 KH-I_FUBP3_rpt1 78..148 CDD:411908 25/72 (35%)
KH-I_FUBP3_rpt2 159..241 CDD:411911 20/84 (24%)
KH-I_FUBP3_rpt3 252..321 CDD:411914 16/100 (16%)
KH-I_FUBP3_rpt4 356..424 CDD:411917 26/70 (37%)

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