DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and Imp

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001245616.1 Gene:Imp / 32009 FlyBaseID:FBgn0285926 Length:638 Species:Drosophila melanogaster


Alignment Length:442 Identity:103/442 - (23%)
Similarity:186/442 - (42%) Gaps:93/442 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI----SDGSCPERIVTVSGTTNAIFSAFTLIT 86
            :|:::|.:.||:|||::|..:....::|.|::::    :.||. |:.:|:.|......:|...|.
  Fly   145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSL-EKSITIYGNPENCTNACKRIL 208

  Fly    87 KKFEEWCSQFNDVGKVGK--TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPN 149
            :..::.....|. |::..  ::|.::::...:..|.:|||||:.||.|.|.|...|.|:|....|
  Fly   209 EVMQQEAISTNK-GELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN 272

  Fly   150 S--TERAVTLSGSAEQITQCIYQICLVMLES--------PPRGATIP-YRPKPQVTGPVILANGQ 203
            |  .||.:|:.|..|.:::...||...:.:|        .|:....| ..|...::.|   .||.
  Fly   273 SFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTP---GNGM 334

  Fly   204 AFTIQ------GNYAV---PTQETCPVFP--------LALATGGLHAGISGLADPLLKGAHLQGA 251
            .|...      .::|:   |.....||||        |.:....:.|.|.      .:|:|::..
  Fly   335 VFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNAVGAIIG------TRGSHIRSI 393

  Fly   252 IPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQH------------ 304
            :...:..|:..|..|..||           :..:...:.....|..:.:.|..            
  Fly   394 MRFSNASLKIAPLDADKPL-----------DQQTERKVTIVGTPEGQWKAQYMIFEKMREEGFMC 447

  Fly   305 ---------EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN--CEEREGGNTDRTITISGNP 358
                     |:.|::..:|.||||||..:.|:::::|::|::..  .....||:.:..:.|.|..
  Fly   448 GTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLF 512

  Fly   359 DSVALAQYLINMSV---------ELQKANLLEQAQSQQNGGAAAAPGAAAAG 401
            .||..||..|...:         :.||| ..||.|.||...|    |||::|
  Fly   513 YSVQSAQRRIRAMMLSTNPPPITKKQKA-AKEQLQQQQQSLA----GAASSG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 17/69 (25%)
KH-I_PCBP_rpt2 107..177 CDD:411806 24/71 (34%)
KH-I_PCBP_rpt3 301..371 CDD:411867 22/92 (24%)
ImpNP_001245616.1 RRM2_VICKZ 42..118 CDD:409794
KH-I_IGF2BP_rpt1 144..211 CDD:411828 17/66 (26%)
KH-I_IGF2BP_rpt2 231..302 CDD:411829 23/70 (33%)
KH-I_IGF2BP_rpt3 368..437 CDD:411830 12/85 (14%)
KH-I_IGF2BP_rpt4 455..523 CDD:411831 20/67 (30%)
Blue background indicates that the domain is not in the aligned region.

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