DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and Igf2bp2

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_898850.2 Gene:Igf2bp2 / 319765 MGIID:1890358 Length:592 Species:Mus musculus


Alignment Length:413 Identity:86/413 - (20%)
Similarity:165/413 - (39%) Gaps:102/413 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI---SDGSCPERIVTV----SGTTNAIF 79
            :...:|:::..:.||:||||:|..:....:::.::::|   .:....|:.||:    .||:.|..
Mouse   185 IDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACR 249

  Fly    80 SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVAS 144
            ....::.|:.:|        .|:.: ::|::::......|.||||.|..:|:|...||..|.::|
Mouse   250 MILEIMQKEADE--------TKLAE-EVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISS 305

  Fly   145 --EMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTI 207
              ::...:.||.:|:.|:.|.......:|...:.|:              ....::..|.||..|
Mouse   306 LQDLSIYNPERTITVRGTIEACANAEIEIMKKLREA--------------FENDMLAVNQQANLI 356

  Fly   208 QGNYAVPTQETCPVFPLALATGGLHA-GISGLADPLLKGAHLQGAIPA--------H-------- 255
            .|              |.|:..|:.: |:|.|..|    |..:|..|:        |        
Mouse   357 PG--------------LNLSALGIFSTGLSVLPPP----AGPRGVPPSPPYHPFATHSGYFSSLY 403

  Fly   256 -HHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTVSNDLIGCIIGK 319
             |||....|                          :|.:.|    :|:...:.:....:|.||||
Mouse   404 PHHHFGPFP--------------------------HHHSYP----EQETVSLFIPTQAVGAIIGK 438

  Fly   320 GGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLLEQAQ 384
            .|..|.::.:.:||.|:|:..|..:  .::|.:.|:|.|::...||..|  ..:|::.|.....:
Mouse   439 KGAHIKQLARFAGASIKIAPAEGPD--VSERMVIITGPPEAQFKAQGRI--FGKLKEENFFNPKE 499

  Fly   385 SQQNGGAAAAPGAAAAGVAAVTG 407
            ..:.......|.:.|..|....|
Mouse   500 EVKLEAHIRVPSSTAGRVIGKGG 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 15/67 (22%)
PCBP_like_KH 109..172 CDD:239089 17/64 (27%)
KH-I 305..368 CDD:238053 18/62 (29%)
Igf2bp2NP_898850.2 RRM1_IGF2BP2 2..78 CDD:241070
RRM <3..>78 CDD:223796
RRM_SF 82..157 CDD:302621
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..182
KH-I 189..252 CDD:238053 15/62 (24%)
KH-I 270..335 CDD:238053 17/64 (27%)
RhoGAP 316..>381 CDD:295372 19/96 (20%)
PCBP_like_KH 422..486 CDD:239089 19/67 (28%)
KH-I 504..568 CDD:238053 4/19 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831587
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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