DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and igf2bp3

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:XP_009292473.1 Gene:igf2bp3 / 30967 ZFINID:ZDB-GENE-000308-1 Length:607 Species:Danio rerio


Alignment Length:359 Identity:85/359 - (23%)
Similarity:144/359 - (40%) Gaps:79/359 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI---SDGSCPERIVTVSGTTNAIFSAFTLI-- 85
            :||::..:.||:||||:|..:....:::.:||:|   .:....|:.:||..|.....||...|  
Zfish   197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCSSACRNIME 261

  Fly    86 --------TKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 142
                    ||..||               ||::::...:..|.||||.|..:|:|.|.|...|.:
Zfish   262 IMQKEAIDTKITEE---------------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITI 311

  Fly   143 A--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAF 205
            :  .::...:.||.:|:.|:.:...:...:|...:.||........:.....:.|..:.|.|   
Zfish   312 SPLQDLTLYNPERTITVKGTLDACAKAEEEIMKKVRESYENDVAAMHLQSNLIPGLNLNALG--- 373

  Fly   206 TIQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPL 270
                           :||.| |:||:...:  ::.|                     |..|:...
Zfish   374 ---------------LFPGA-ASGGISPSV--VSGP---------------------PPGAQAGY 399

  Fly   271 ASLAALGLAGMNP--ASTGGINH--TANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQIS 331
            .|....|..|..|  |||...|.  ||..|....:..| :.:....:|.||||.|..|.::.:.:
Zfish   400 QSFGCSGFEGEVPFWASTLSSNSGCTAFSAQMESETVH-LFIPALAVGAIIGKQGQHIKQLSRFA 463

  Fly   332 GAMIRISNCEEREGGNTDRTITISGNPDSVALAQ 365
            ||.|:|:..:..:.  ..|.:.|||.|::...||
Zfish   464 GASIKIAPADGIDA--KQRMVIISGPPEAQFKAQ 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 22/78 (28%)
KH-I_PCBP_rpt2 107..177 CDD:411806 18/71 (25%)
KH-I_PCBP_rpt3 301..371 CDD:411867 19/65 (29%)
igf2bp3XP_009292473.1 RRM_SF 1..77 CDD:473069
RRM2_IGF2BP3 81..156 CDD:410039
KH-I 196..271 CDD:469614 19/73 (26%)
KH-I 274..368 CDD:469614 23/108 (21%)
KH-I_IGF2BP3_rpt3 430..507 CDD:411926 19/69 (28%)
KH-I_IGF2BP1_rpt4 515..590 CDD:411927
Blue background indicates that the domain is not in the aligned region.

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