DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and Igf2bp2

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001257527.1 Gene:Igf2bp2 / 303824 RGDID:1305614 Length:592 Species:Rattus norvegicus


Alignment Length:413 Identity:87/413 - (21%)
Similarity:166/413 - (40%) Gaps:102/413 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI---SDGSCPERIVTV----SGTTNAIF 79
            :...:|:::..:.||:||||:|..:....:::.::::|   .:....|:.||:    .||:.|..
  Rat   185 IDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACR 249

  Fly    80 SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVAS 144
            ....::.|:.:|        .|:.: ::|::::......|.||||.|..:|:|...||..|.::|
  Rat   250 MILEIMQKEADE--------TKLAE-EVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISS 305

  Fly   145 --EMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTI 207
              ::...:.||.:|:.|:.|.......:|...:.|:              ....::..|.||..|
  Rat   306 LQDLSIYNPERTITVKGTIEACASAEMEIMKKLREA--------------FENDMLAVNQQANLI 356

  Fly   208 QGNYAVPTQETCPVFPLALATGGLHA-GISGLADPLLKGAHLQGAIPA--------H-------- 255
            .|              |.|:..|:.: |:|.|..|    |..:||.|:        |        
  Rat   357 PG--------------LNLSALGIFSTGLSVLPPP----AGPRGAPPSPPYHPFATHSGYFSSLY 403

  Fly   256 -HHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTVSNDLIGCIIGK 319
             |||....|                          :|.:.|    :|:...:.:....:|.||||
  Rat   404 PHHHFGPFP--------------------------HHHSYP----EQETVSLFIPTQAVGAIIGK 438

  Fly   320 GGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLLEQAQ 384
            .|..|.::.:.:||.|:|:..|..:  .::|.:.|:|.|::...||..|  ..:|::.|.....:
  Rat   439 KGAHIKQLARFAGASIKIAPAEGPD--VSERMVIITGPPEAQFKAQGRI--FGKLKEENFFNPKE 499

  Fly   385 SQQNGGAAAAPGAAAAGVAAVTG 407
            ..:.......|.:.|..|....|
  Rat   500 EVKLEAHIRVPSSTAGRVIGKGG 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 16/72 (22%)
KH-I_PCBP_rpt2 107..177 CDD:411806 19/71 (27%)
KH-I_PCBP_rpt3 301..371 CDD:411867 20/69 (29%)
Igf2bp2NP_001257527.1 RRM1_IGF2BP2 2..78 CDD:241070
RRM2_IGF2BP2 82..157 CDD:410038
KH-I_IGF2BP2_rpt1 188..261 CDD:411919 16/72 (22%)
KH-I 265..360 CDD:469614 25/123 (20%)
KH-I_IGF2BP2_rpt3 419..495 CDD:411925 22/79 (28%)
KH-I_IGF2BP2_rpt4 502..578 CDD:411928 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.

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