Protein Alignment mub and Pcbp3

DIOPT Version :10

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: XP_006256345.1
• Gene: Pcbp3 / 294336
• RGDID: 1307430
• Length: 394
• Species: Rattus norvegicus
• Alignment Length: 397
• Identity: 194/397 - (48%)
• Similarity: 241/397 - (60%)
• Gaps: 89/397 - (22%)

  Fly     9 SAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSG 73
            |.||.       :|||||||:|.|||||||||||||.|.:.||||||:||||:|:|||||||::|
  Rat    38 SEGGL-------NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITG 95

  Fly    74 TTNAIFSAFTLITKKFEE-WCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
            .|:|||.||.:|..|||| ..:..::.....|..:.:||:||||||||||||.||||||||::||
  Rat    96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 160

  Fly   138 CSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANG 202
            ..:|||.:|||||||||||:||:.:.|.||:.|||:|||||||:||||||||||..| |||.|.|
  Rat   161 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAST-PVIFAGG 224

  Fly   203 Q-----------------------AFTIQGNYAVP------------TQETCPVFPLALATGGLH 232
            |                       |:||||.||:|            .|:| |..||
  Rat   225 QVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDQLTKLHQLAMQQT-PFPPL-------- 280

  Fly   233 AGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPAN 297
                |..:|...|..|    |.|      ..:.|:|.:..  :.||....||||
  Rat   281 ----GQTNPAFPGEKL----PLH------SSEEAQNLMGQ--SSGLDASPPAST----------- 318

  Fly   298 RAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVA 362
                  ||:|:.|||||||||:.||||.||||:|||.|:|:|..|   |:::|.|||:|.|.:::
  Rat   319 ------HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE---GSSERQITITGTPANIS 374

  Fly   363 LAQYLIN 369
            |||||||
  Rat   375 LAQYLIN 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	KH-I_PCBP_rpt1	26..92	CDD:411866	48/66 (73%)
		KH-I_PCBP_rpt2	107..177	CDD:411806	48/69 (70%)
		KH-I_PCBP_rpt3	301..371	CDD:411867	41/69 (59%)
Pcbp3	XP_006256345.1	KH-I_PCBP3_rpt1	38..114	CDD:411944	54/82 (66%)
		KH-I_PCBP3_rpt2	125..203	CDD:411947	52/77 (68%)
		KH-I_PCBP3_rpt3	309..383	CDD:411950	47/93 (51%)