DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and usp108

DIOPT Version :10

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_594545.2 Gene:usp108 / 2541487 PomBaseID:SPAC23D3.08 Length:337 Species:Schizosaccharomyces pombe


Alignment Length:388 Identity:83/388 - (21%)
Similarity:137/388 - (35%) Gaps:134/388 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IRLIMQGKEV----------GSIIGKKGEI-VNRFREESGA-KINISDGSCPERIVTVSGTTNAI 78
            :||::..::|          ...|.|.|:: |..:...:.| ||.|...|       ||...::|
pombe    35 VRLVLTAQQVQEWNLLPQDIQQEILKNGQVRVETYSSSNTARKIFICTSS-------VSNLASSI 92

  Fly    79 FSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ--------- 134
            .:...::|...||..|            :.|.|.|     .|||  .|||:. |.|         
pombe    93 PALIKVVTPTKEEDAS------------LNINLAV-----SSLI--LGSKVL-IHQNLIPSLFSV 137

  Fly   135 TTGCSIQVASEMLPNSTERAVTLSGS---AEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGP 196
            :....:..::.:||.|:||.|||..:   |..:.:.:.:..|..:...||.:.:||.|.....  
pombe   138 SNSTKLLYSASLLPRSSERLVTLETNEIDASVVIETLLKYILSRISFIPRVSVVPYIPDAAYG-- 200

  Fly   197 VILANGQAFTIQGN-----------YAVPTQETCPVFPLALATGGLHAGISGLADPLLKG---AH 247
             |..:...|| |.|           |.:|        |:||.:.|      |..|||...   .|
pombe   201 -IYGSPSTFT-QFNHMSSMVTPENPYGIP--------PIALTSAG------GNPDPLRTTQVFPH 249

  Fly   248 LQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTVSNDL 312
            ...:||                           :|.|:|             |....:|:|.:.|
pombe   250 SGPSIP---------------------------LNIAAT-------------QVVSQKMSVPSSL 274

  Fly   313 IGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQ 375
            :..:......|:.||.|.:.|.|.:   ||.:..:.::.|::.|..::        |.|..:|
pombe   275 LDQLYHAMPHKLMEISQNTNANITV---EESDSNSNEKFISVVGTSEA--------NQSALMQ 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 17/77 (22%)
KH-I_PCBP_rpt2 107..177 CDD:411806 21/81 (26%)
KH-I_PCBP_rpt3 301..371 CDD:411867 14/69 (20%)
usp108NP_594545.2 KH-I 265..332 CDD:469614 16/73 (22%)

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