DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mub and IGF2BP3

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:XP_011513391.1 Gene:IGF2BP3 / 10643 HGNCID:28868 Length:584 Species:Homo sapiens


Alignment Length:418 Identity:87/418 - (20%)
Similarity:163/418 - (38%) Gaps:105/418 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI---SDGSCPER 67
            :|......|:..:.| ..|.:||::..:.||:||||:|..:....:::.:||::   .:....|:
Human   184 SSRQGSPGSVSKQKP-CDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEK 247

  Fly    68 IVTV----SGTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSK 128
            .:|:    .||:.|..|...::.|:.::  .:|.:       :||::::...:..|.||||.|..
Human   248 SITILSTPEGTSAACKSILEIMHKEAQD--IKFTE-------EIPLKILAHNNFVGRLIGKEGRN 303

  Fly   129 IKEIRQTTGCSIQVA--SEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKP 191
            :|:|.|.|...|.::  .|:...:.||.:|:.|:.|...:...:|...:.||             
Human   304 LKKIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRES------------- 355

  Fly   192 QVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHH 256
             ....:...|.||..|.|                                               
Human   356 -YENDIASMNLQAHLIPG----------------------------------------------- 372

  Fly   257 HHLQQMPDVAKNPLASLAALGL----AGMNPASTGGINHTANPANRAQQQQHE---MTVSNDLIG 314
                          .:|.||||    :||.|.::|..:....|..:.:|.:.|   :.:....:|
Human   373 --------------LNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVG 423

  Fly   315 CIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANL 379
            .||||.|..|.::.:.:||.|:|:..|..:.  ..|.:.|:|.|::...||..|  ..::::.|.
Human   424 AIIGKQGQHIKQLSRFAGASIKIAPAEAPDA--KVRMVIITGPPEAQFKAQGRI--YGKIKEENF 484

  Fly   380 LEQAQSQQNGGAAAAPGAAAAGVAAVTG 407
            :...:..:.......|..||..|....|
Human   485 VSPKEEVKLEAHIRVPSFAAGRVIGKGG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 17/67 (25%)
PCBP_like_KH 109..172 CDD:239089 17/64 (27%)
KH-I 305..368 CDD:238053 19/65 (29%)
IGF2BP3XP_011513391.1 RRM1_IGF2BP3 1..77 CDD:241071
RRM <2..>87 CDD:223796
RRM2_IGF2BP3 81..161 CDD:241074
KH-I 203..266 CDD:238053 17/62 (27%)
KH-I 284..349 CDD:238053 17/64 (27%)
PCBP_like_KH 412..475 CDD:239089 18/64 (28%)
KH-I 494..559 CDD:238053 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141645
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394765at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.