Protein Alignment mub and nova1

DIOPT Version :10

• Sequence 1: NP_001246875.1
• Gene: mub / 40436
• FlyBaseID: FBgn0262737
• Length: 573
• Species: Drosophila melanogaster
• Sequence 2: NP_001096339.1
• Gene: nova1 / 100124925
• XenbaseID: XB-GENE-949963
• Length: 508
• Species: Xenopus tropicalis
• Alignment Length: 478
• Identity: 120/478 - (25%)
• Similarity: 186/478 - (38%)
• Gaps: 135/478 - (28%)

  Fly    26 IRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG-----SCPERIVTVSGTTNAIFSAFTLI 85
            :::::.....||||||.|:.:.:.::|:||.|.:|..     ...||:..:.||..|:.:....|
 Frog    52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFI 116

  Fly    86 TKKFEEWCSQFNDVGKVGKTQ----------------------IP------------------IR 110
            .:|..|...      .|.||:                      :|                  ::
 Frog   117 AEKIREMPQ------NVAKTEPVSILQPQTTVNPDRIKQTLSSLPPATKSSPSDPMTISRASQVK 175

  Fly   111 LIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLP---NSTERAVTLSGSAEQITQCIYQIC 172
            :|||.|..|.:|||.|:.:|.:.:.:|..:|::.:  |   |..||.||:||..||..:.:..|.
 Frog   176 IIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK--PDGINLQERVVTVSGEPEQNRKAVELIV 238

  Fly   173 LVMLESPPRGA--TIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQETCPVFPLALATGGL--HA 233
            ..:.|.|..|:  .|.|   ..|||||..:|..        ..|...|..|.|.|.|..||  ||
 Frog   239 QKIQEDPQSGSCLNISY---ANVTGPVANSNPT--------GSPYANTAEVLPTAAAAAGLLGHA 292

  Fly   234 GISGLA--DPLLKG--------------------------------AHLQGAIPAHHHHLQQMPD 264
            .::|:|  ..:|.|                                |...||:.|..........
 Frog   293 NLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAA 357

  Fly   265 VAKNPLASLA-----------------ALGLAGMNPASTGGINHTANP-----------ANRAQQ 301
            .|.|.||:.|                 |||......|:|.|....|:|           :....:
 Frog   358 AAANLLATYASEATAGGGTAAGAAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGSK 422

  Fly   302 QQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQY 366
            ...|:.|..:|:|.|:||||..:.|.::::||.|:||...|...|..:|.:||:|.|.:...|||
 Frog   423 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQY 487

  Fly   367 LINMSVELQKANLLEQAQSQQNG 389
            ||...|..::.  :..|..|:.|
 Frog   488 LITQRVTYEQG--VRAANPQKVG 508

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mub	NP_001246875.1	KH-I_PCBP_rpt1	26..92	CDD:411866	19/70 (27%)
		KH-I_PCBP_rpt2	107..177	CDD:411806	24/90 (27%)
		KH-I_PCBP_rpt3	301..371	CDD:411867	27/69 (39%)
nova1	NP_001096339.1	KH-I_NOVA_rpt1	49..121	CDD:411863	19/68 (28%)
		KH-I_NOVA_rpt2	173..241	CDD:411864	23/69 (33%)
		KH-I_NOVA_rpt3	423..493	CDD:411807	27/69 (39%)