DRSC/TRiP Functional Genomics Resources

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Protein Alignment mub and zgc:162999

DIOPT Version :9

Sequence 1:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001083021.1 Gene:zgc:162999 / 100038772 ZFINID:ZDB-GENE-070424-78 Length:350 Species:Danio rerio


Alignment Length:386 Identity:184/386 - (47%)
Similarity:234/386 - (60%) Gaps:87/386 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSG 73
            |.||.       :|||||||:|.|||||||||||||.|.:.||||.|:||:|:|:|||||||::|
Zfish     8 SEGGL-------NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEGNCPERIVTITG 65

  Fly    74 TTNAIFSAFTLITKKFEE-WCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
            .|:|||.||.:|..|||| ..:..::.....|..:.:||:||||||||||||.||||||:|::||
Zfish    66 PTDAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTG 130

  Fly   138 CSIQVASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANG 202
            ..:|||.:|||||||||||:||:.|.|.||:.|||:|||||||:|||||||||| .|.|||.:.|
Zfish   131 AQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKP-ATAPVIFSGG 194

  Fly   203 Q------------------------AFTIQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLL 243
            |                        |:||||.||:|                 |..::.|     
Zfish   195 QVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAIP-----------------HPDLTKL----- 237

  Fly   244 KGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTV 308
                       |...:||      .|..||      |....:..|::.:      :|...||:|:
Zfish   238 -----------HQLAMQQ------TPFTSL------GQTTPAFPGVDAS------SQASTHELTI 273

  Fly   309 SNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLIN 369
            .|||||||||:.||||.||||:|||.|:|:|..|   |::||.|||:|.|.:::|||||||
Zfish   274 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAME---GSSDRQITITGTPANISLAQYLIN 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mubNP_001246875.1 PCBP_like_KH 25..86 CDD:239089 42/60 (70%)
PCBP_like_KH 109..172 CDD:239089 44/62 (71%)
KH-I 305..368 CDD:238053 38/62 (61%)
zgc:162999NP_001083021.1 PCBP_like_KH 17..78 CDD:239089 42/60 (70%)
PCBP_like_KH 101..165 CDD:239089 44/63 (70%)
KH-I 268..330 CDD:238053 39/64 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H23233
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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