DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and aldh1a3

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001038210.1 Gene:aldh1a3 / 751785 ZFINID:ZDB-GENE-061128-2 Length:513 Species:Danio rerio


Alignment Length:502 Identity:150/502 - (29%)
Similarity:236/502 - (47%) Gaps:67/502 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 GKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPK---WDRVSIADRLKIWEKA 140
            ||::.|......|       |:.....|||..:::|:|.|.....:   |.|:..:.|.::..:.
Zfish    46 GKQFPTINPATGV-------KICDIEEADKADVDEAVKAAKAAGQRGSVWRRMDASSRGRLLNRL 103

  Fly   141 ADLMATTYRQDLNAATMLGQSKT-------AIQAEIDSAAELIDFIRMNAYFLKEV-TKYQPISE 197
            |||:.   |:....||:  :||.       |...::|.:   |..:|..|.:..:: .|..|:.|
Zfish   104 ADLLE---RERAVLATL--ESKDTGKPFLHAFFVDLDGS---IKTLRYYAGWTDKIHGKTMPVDE 160

  Fly   198 N-IKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPAL-MGNGVLWKPSDTAMLSNWIIFKIM 260
            | :..||:.     ..|...|:.|:||..:.......||| .||.|:.||::...|:...:..::
Zfish   161 NFVCFTKHE-----PIGVCGAIIPWNFPLLMLMWKIAPALACGNTVVLKPAEQTPLTALHVAALI 220

  Fly   261 REAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYV---NFPRL 322
            :|||.|.||||.||..||..|..|....::..:.||||.        :||..:....   |..|:
Zfish   221 KEAGFPPGVVNVVPGFGPTAGAAIAGHMNIDKLAFTGST--------EVGQLVKAAAASSNLKRV 277

  Fly   323 TGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLK 387
            |.|.||||...:.|.:|::..|..|.:.||...||.|:|.||:||.|.::.:.....|..|..:.
Zfish   278 TLELGGKNPCIVFADSDLQLAVEETQKGAFFNQGQACTAASRVYVQEPVYEEFVRLSVERAKNIV 342

  Fly   388 IGDVQDFSSFTSAVIDDKAFKRITGYIEHAKK-SPNLEILAGGTYSDSKGYFVNPTIVLSKDPKD 451
            |||..:..:.....||...|::|...::..|| ...||.  ||...:.:|.|::|||.  .|.||
Zfish   343 IGDPMEPRTSHGPQIDQHQFEKILALVDSGKKEGAKLEF--GGCAVEDRGLFIHPTIF--SDVKD 403

  Fly   452 --RIMTEEIFGPVLSIYVYK-ESDLLETMKLVHTSTKFALTGAVFGQDED---FVKCALQEFKMA 510
              ||..|||||||..|..:: :.|:::..    .|::|.||.|||.:|..   .|..||:     
Zfish   404 HMRIAKEEIFGPVQCIMKFECQQDVIDRA----NSSQFGLTAAVFTRDVQRAMSVSAALE----- 459

  Fly   511 AGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAGGPHYILRWTSPQSI 557
            ||..::|  ...::..|.||||.:||| |.:..|.:.:..:|..::|
Zfish   460 AGTVWVN--CYNALHAQTPFGGYKMSG-NGRELGEYALAEYTEVKAI 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 150/502 (30%)
aldh1a3NP_001038210.1 ALDH_F1AB_F2_RALDH1 28..506 CDD:143459 150/502 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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