DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh8a1

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001178017.2 Gene:Aldh8a1 / 685750 RGDID:1590218 Length:487 Species:Rattus norvegicus


Alignment Length:536 Identity:136/536 - (25%)
Similarity:232/536 - (43%) Gaps:71/536 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 KERKALEQALKGTASSCEDIPIVIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTA 118
            :|...||..:.|....|..   .|...:..|.|| |..:|:           :.|:.||.|::.|
  Rat     5 RELLMLENFIGGKFLPCNS---YIDSYDPSTGEV-YCKVPN-----------SGKEEIEVAVQAA 54

  Fly   119 VETQPKWDRVSIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAE-IDSAAELIDFIRMN 182
            .|..|.|...|..:|..|..:.||::..:. ::|..|....|.||...|. :|....:::|    
  Rat    55 REAFPAWSSRSPQERSLILNRVADVLEQSL-EELAQAESKDQGKTLTLARTMDIPRSVLNF---- 114

  Fly   183 AYFLKEVTKYQPISENIKVTK-NSLRYR-----GIDGFIAAVSPFNFTAIGGNLSYTPAL-MGNG 240
            .:|...:..:  :|:..:::. ..:.|.     ||.|.|   ||:|...........||: .||.
  Rat   115 RFFASSIQHH--VSDCTEMSHLGCMHYTVRTPVGIAGLI---SPWNLPLYLLTWKIAPAIAAGNT 174

  Fly   241 VLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRL 305
            |:.|||:...::.|:..|::.:||||.||:|.|...||..|:.:.:.|.:..|:||||.||..|:
  Rat   175 VIAKPSELTSVTAWMFCKLLDKAGVPPGVINVVFGTGPRVGEALVSHPEVPVISFTGSQPTAERI 239

  Fly   306 WKQVGNNIDNYVNFP---RLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYV 367
                     ..::.|   :|:.|.||||...|...|::|..:.:|:||:|...|:.|...||::|
  Rat   240 ---------TQLSAPHCKKLSLELGGKNPAIIFEDANLEECIPATVRSSFANQGEICLCTSRIFV 295

  Fly   368 PESLWPQIKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGG--- 429
            ..|::.:..:..|....|.|:|...|.|:...|:|.....:::..|:..| .:...:||.|.   
  Rat   296 QRSIYNEFLKRFVEATRKWKVGIPSDPSANMGALISKAHLEKVRSYVTKA-HAEGAKILCGEGVD 359

  Fly   430 ----TYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTG 490
                ...:..|||:.||::.....:...|||||||||..:..:   |..|.:.......|:.|..
  Rat   360 QLSLPLRNQAGYFMLPTVITDIKDESCCMTEEIFGPVTCVVPF---DSEEEVIARANGVKYGLGA 421

  Fly   491 AVFGQDEDFVKCALQEFKMAAGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAGGPHYILRWTSPQ 555
            .|:.:|...:....:  ::.:|..:.|......:  ..||||.:.||...:.....|        
  Rat   422 TVWSKDVGRIHRVAK--RLQSGLVWTNCWLIREL--NLPFGGMKSSGIGREGAKDSY-------- 474

  Fly   556 SIKETFVPLRDVNYPY 571
               :.|..::.:...|
  Rat   475 ---DFFTEIKTITIKY 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 135/526 (26%)
Aldh8a1NP_001178017.2 ALDH_F8_HMSADH 27..485 CDD:143412 129/507 (25%)

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