DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh4a1

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001128170.1 Gene:Aldh4a1 / 641316 RGDID:1624206 Length:562 Species:Rattus norvegicus


Alignment Length:559 Identity:332/559 - (59%)
Similarity:419/559 - (74%) Gaps:5/559 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LQQSLLKSSTRCLGSVIPDLKLKDFPIANEPILGYLKDSKERKALEQALKGTASSCEDIPIVIGG 79
            |::|||..:.|  ||.:.........:||||||.:.:.|.||.||::||.......|.||.|:|.
  Rat     7 LRRSLLSYAWR--GSGLRWKHASSLKVANEPILAFTQGSPERDALQKALNDLKDQTEAIPCVVGD 69

  Fly    80 KEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAADLM 144
            :|..|.:||||:.|.:|.||:|.|.||||.|:.|||:.||..:.:||...:|||.:|:.||||::
  Rat    70 EEVWTSDVRYQLSPFNHGHKVAKFCYADKALLNKAIEAAVLARKEWDLKPVADRAQIFLKAADML 134

  Fly   145 ATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQPISENIKVTKNSLRYR 209
            :...|.::.|.||:||.||.||||||:|||||||.|.||.|..|:...||||  :..:.|.:.||
  Rat   135 SGPRRAEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPIS--VPPSTNHVVYR 197

  Fly   210 GIDGFIAAVSPFNFTAIGGNLSYTPALMGNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVP 274
            |::||:||:||||||||||||:..||||||.|||||||||||:::.:::|:||||:|..|:.|||
  Rat   198 GLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNVIQFVP 262

  Fly   275 ADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECGGKNFHFIHASAD 339
            ||||.||||:|:|.||.|||||||||||..|||||..|:|.:..||||.||||||||||:|:|||
  Rat   263 ADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFRTFPRLAGECGGKNFHFVHSSAD 327

  Fly   340 VESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGD-VQDFSSFTSAVID 403
            |:|||:.|:||||||.|||||||||:|||:|||||||..|:.|.:::|:|: .:||.:|.|||||
  Rat   328 VDSVVSGTLRSAFEYGGQKCSACSRLYVPQSLWPQIKGRLLEEHSRIKVGNPAEDFGTFFSAVID 392

  Fly   404 DKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVY 468
            .|||.||..::|||:.||:|.|||||..::|.||||.|.|:.||||::.||.||||||||::|||
  Rat   393 AKAFARIKKWLEHARSSPSLSILAGGQCNESVGYFVEPCIIESKDPQEPIMKEEIFGPVLTVYVY 457

  Fly   469 KESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMAAGNFYINDKSTGSVVGQQPFGGG 533
            .:....||::||.::|.:.||||||.||:..|:.|.:..:.|||||||||||||||||||||||.
  Rat   458 PDEKYRETLQLVDSTTSYGLTGAVFAQDKTIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGA 522

  Fly   534 RMSGTNDKAGGPHYILRWTSPQSIKETFVPLRDVNYPYM 572
            |.||||||.|||||||||||||.||||..||.|..|.||
  Rat   523 RASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWRYSYM 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 319/522 (61%)
Aldh4a1NP_001128170.1 ALDH_F4-17_P5CDH 31..552 CDD:143441 319/522 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 559 1.000 Domainoid score I228
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6081
Inparanoid 1 1.050 623 1.000 Inparanoid score I836
OMA 1 1.010 - - QHG63568
OrthoDB 1 1.010 - - D293592at33208
OrthoFinder 1 1.000 - - FOG0004722
OrthoInspector 1 1.000 - - oto98629
orthoMCL 1 0.900 - - OOG6_102275
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3320
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.880

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