DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh3b2

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001170909.1 Gene:Aldh3b2 / 621603 MGIID:2147613 Length:479 Species:Mus musculus


Alignment Length:523 Identity:111/523 - (21%)
Similarity:197/523 - (37%) Gaps:135/523 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 EYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAADLMA 145
            |::|.::|          .|..|...:|:|::.|:                        |.|:..
Mouse    37 EFRTAQLR----------SLGRFLQENKELLQDAL------------------------AKDVGK 67

  Fly   146 TTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQPISENIKVTKNSLRY-- 208
            :.:..|::...:       .:.|:|.|.:          .|:...|.:|:|.|: :||.|..:  
Mouse    68 SGFESDMSEIIL-------CENEVDLALK----------NLQTWMKDEPVSTNL-LTKLSSAFIR 114

  Fly   209 RGIDGFIAAVSPFNFTAIGGNLSYTPAL----MGNGVLWKPSDTAMLSNWIIFKIMREAGVPDGV 269
            :...|.:..::|:|:..   ||...|.:    .||.|:.|||:.:..:..::.:::.:  ..|..
Mouse   115 KEPFGLVLIIAPWNYPV---NLMIIPLVGAIAAGNCVVLKPSEISKNTEKVLAELLPQ--YLDQS 174

  Fly   270 VNFVPADGP-------------VFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPR 321
            ...|...||             :|   .|.||.:..|..|.:..                 :...
Mouse   175 CFAVMLGGPEETRQLLEHKFDYIF---FTGSPRVGKIVMTAAAK-----------------HLTP 219

  Fly   322 LTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSA-----CSRMYVPESLWPQIKEGLVC 381
            :|.|.||||..::..:.|.::|........:...||.|.|     ||: .:.|.|.|.::..:. 
Mouse   220 ITLELGGKNPCYVDDNCDPQTVANRVAWFRYFNAGQTCVAPDYILCSQ-EMQERLVPALQNSIT- 282

  Fly   382 EAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLS 446
                ...||....|.....:|:.|.|||:.|.:...:       :|.|..||....::.||:::.
Mouse   283 ----RFYGDNPQTSPNLGRIINQKHFKRLQGLLGCGR-------VAIGGQSDEGERYIAPTVLVD 336

  Fly   447 KDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMAA 511
            ....:.:|.||||||:|.:...:..|  |.::.::...| .|....|..:...|...|:  :.::
Mouse   337 VQETEPVMQEEIFGPILPLVTVRSLD--EAIEFINRREK-PLALYAFSNNNQVVNQMLE--RTSS 396

  Fly   512 GNFYINDKSTGSVVGQQPFGG------GRMSGTNDKAGGPHY---ILRWTSPQSIKETFVPLRDV 567
            |.|..||......:...|.||      ||..|........|:   :||  ||...|     |.|:
Mouse   397 GGFGGNDGFLYLTLPALPLGGVGNSGMGRYHGKFSFDTFSHHRACLLR--SPGMEK-----LNDL 454

  Fly   568 NYP 570
            .||
Mouse   455 RYP 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 107/514 (21%)
Aldh3b2NP_001170909.1 ALDH_F3AB 18..459 CDD:143450 111/523 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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