DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh1a3

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_444310.3 Gene:Aldh1a3 / 56847 MGIID:1861722 Length:512 Species:Mus musculus


Alignment Length:482 Identity:144/482 - (29%)
Similarity:221/482 - (45%) Gaps:41/482 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 KLASFYYADKKLIEKAI---KTAVETQPKWDRVSIADRLKIWEKAADLMATTYRQDLNAATMLGQ 160
            |:......||..::||:   :.|.:....|.|:....|.::..:.|||:... |..|.....:..
Mouse    59 KICEVEEGDKPDVDKAVEAAQAAFQRGSPWRRLDALSRGQLLHQLADLVERD-RAILATLETMDT 122

  Fly   161 SKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQ----PISENIKVTKNSLRYRGIDGFIAAVSPF 221
            .|..:.|..   .:|...|:...||.....|.|    |..:|:..   ..|:..| |...|::|:
Mouse   123 GKPFLHAFF---VDLEGCIKTFRYFAGWADKIQGRTIPTDDNVVC---FTRHEPI-GVCGAITPW 180

  Fly   222 NFTAIGGNLSYTPAL-MGNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTIT 285
            ||..:.......||| .||.|:.||::...|:...:..:::|.|.|.||||.||..||..|..|:
Mouse   181 NFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYLASLIKEVGFPPGVVNIVPGFGPTVGAAIS 245

  Fly   286 ASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRS 350
            :.|.:..|.||||... .:|.::..:.    .|..|:|.|.||||...:.|.||::..|....:.
Mouse   246 SHPQINKIAFTGSTEV-GKLVREAASR----SNLKRVTLELGGKNPCIVCADADLDLAVECAHQG 305

  Fly   351 AFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIE 415
            .|...||.|:|.||::|.|.::.:.....|..|.|..:||..|..:.....||.|.|.:|...||
Mouse   306 VFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIE 370

  Fly   416 HAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLV 480
            ..||. ..::..||:..:.:|.|:.||:........||..|||||||..|..:|  :|.|.:|..
Mouse   371 SGKKE-GAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFK--NLEEVIKRA 432

  Fly   481 HTSTKFALTGAVFGQDEDFVKCALQEFKMAA----GNFYINDKSTGSVVGQQPFGGGRMSGTNDK 541
            : ||.:.||.|||.::.|      :..|:||    |..:||  ...:...|.||||.:||| |.:
Mouse   433 N-STDYGLTAAVFTKNLD------KALKLAAALESGTVWIN--CYNAFYAQAPFGGFKMSG-NGR 487

  Fly   542 AGGPHYILRWTSPQSIKETFVPLRDVN 568
            ..|.:.:..:|   .:|...:.|.:.|
Mouse   488 ELGEYALAEYT---EVKTVTIKLEEKN 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 142/475 (30%)
Aldh1a3NP_444310.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
ALDH_F1AB_F2_RALDH1 26..506 CDD:143459 142/475 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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